| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0834 |
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| Symbol | |
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| ID | 5746388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 928219 |
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| End bp | 929424 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641295914 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001561865 |
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| Protein GI | 160896283 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAT TCGCCACAGC TCGTACCTGG ACTGTCGCAA CGGCCCTGAT CGCTGCGTTC
GCAGCGGCCC ACGCGCAGCA GCTTCCGGTG ACGGCATCGC AGCGCTCGGC CGCCCAGCAG
GTGGCCCAGC AGGGCGTTCC CGTGGGCGAG CTGGCGCCCG ATGCGCCCGA CAGCTACACC
GTCAAGCGCG GCGACACGCT GTGGGGCATC TCCGGCATGT ACCTGCGCCG TCCCTGGCGC
TGGCCCGAGC TGTGGGGCAT GAACATGCAG GCCATCGCCA ATCCCCACCT CATCTATCCG
GGCCAGGTGC TGTACCTGGA CAAGCGTGAT GGCTATGCCC GCCTGAGCAC GGCGCGGCCC
ATGGGCGACG GCGGCGAGCC CGGTGTGGTG CGCGTGTCTC CGAGCACGCG CAGCGAGTCG
CTGGCGCAGG CGGCCCTGCC CACGCTGCAG CCCCATCTGA TCGAGCCCTT CCTGGCCGAG
CCGCTGGTCG TCGATGCCGA AACGCTGCTG CGCGCGCCAC GCCTGATCGC CACCACGGAC
GAGCGCGTGC TCATGGCCAG CGGTGACCGT GCCTATGCGC GTGGCACGGC CGAGGCGCCG
CTGCGCAAAG GCGACGGCCT GCCGCGCCAG TACCGTGTCT TCCGCGATGC GGTGGCGCTC
AAGGATCCCA TCTCCGGTGA GGTGCTGGGC TACGAGGCCA AGTACCTGGG CCTGGCCGAT
CTCATCGAGG GCGAGACCTC GCTGGAGATC GTGGACAGCA AGGGCGAAAA GCACGAGCAG
GCCTCTCCCG CCACGGTGGA CCTGTCGCGC GCCAAGACAG AGATGCGTGC CGGTGACCGC
CTGCTGCCCG CACCGGAACG AACCTACATG AACTATGCGC CGCATGCGCC GCAGGCTGCC
GTGAAGGCCC ATGTGGTGTC CCTGTACGGC GACCAGGCCG TGCGCTGGGC GGCCAACAAC
CAGGTCATTG CCATCAACAA GGGCACGCAG GACGGCATGG ACGTGGGCAC GGTGCTGGAG
CTGATCCGCC GTGGCGTGCG CATCGTGGAC AAGACGGGCG ACAAGAAGGA AGAAGTGCAG
CTGCCCGACG AACGCAATGG TTACGCCATG GTGTTCCGCA CCTTCGATCG CGTCTCCTAC
GCGCTGATCC TGGAGGCACG GCGCGGCGTC GAGGTGGGCG ACAGCCTGAC CTCGCCGGCT
CCCTGA
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| Protein sequence | MTAFATARTW TVATALIAAF AAAHAQQLPV TASQRSAAQQ VAQQGVPVGE LAPDAPDSYT
VKRGDTLWGI SGMYLRRPWR WPELWGMNMQ AIANPHLIYP GQVLYLDKRD GYARLSTARP
MGDGGEPGVV RVSPSTRSES LAQAALPTLQ PHLIEPFLAE PLVVDAETLL RAPRLIATTD
ERVLMASGDR AYARGTAEAP LRKGDGLPRQ YRVFRDAVAL KDPISGEVLG YEAKYLGLAD
LIEGETSLEI VDSKGEKHEQ ASPATVDLSR AKTEMRAGDR LLPAPERTYM NYAPHAPQAA
VKAHVVSLYG DQAVRWAANN QVIAINKGTQ DGMDVGTVLE LIRRGVRIVD KTGDKKEEVQ
LPDERNGYAM VFRTFDRVSY ALILEARRGV EVGDSLTSPA P
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