Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0824 |
Symbol | pyrF |
ID | 5746378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 920242 |
End bp | 921069 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641295904 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_001561855 |
Protein GI | 160896273 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTTC TCGACATGCT GCGCAATGCC ACCGCCCAGA ACCAATCCAT GCTGTGCGTG GGCCTGGACC CCGAACCCAG CCGCTTTCCT GCGGCCATGC GCGGCGATGC AAGCAAAATC TACGACTTCT GCGCCGCCAT CGTCGACGCC ACGGCCGACC TGGTGAACTC CTTCAAGCCC CAGATCGCCT ACTTCGCGGC CCACCGCGCC GAAGACCAGC TGGAAAAGCT CATGGCGCAC ATGCGCGCCG TCGCGCCCCA TGTGCCCATC ATCCTGGACG CCAAGCGCGG CGACATCGGC TCCACGGCAG AGCAATACGC CAAGGAAGCC TTCGAGCGCT ACGGCGCCGA CGCCGTGACC CTGTCGCCCT TCATGGGCTT CGACTCCATC ACGCCCTACC TGCAGTACGA GGGCAAGGGC GCCTTCCTGC TGTGCCGCAC CTCCAACCCC GGCGGTGACG ACCTGCAGGC CCAGCGCCTG GCCGACCTGC CGGGCCAGCC CCACCTGTTC GAGCATGTGG CGCGCCTGGC GCAGGGGCCC TGGAACACCA ACGGCCAGCT CGGCCTGGTG GTGGGCGCCA CGCGCCCGCA GGAGATCGAG CGCGTGCGTG AATTCGCGCC CTCGCTGCCG CTGCTGATTC CCGGCGTGGG CGCCCAGGGG GGCGATGCCG TGGCCACGGT CAAGGCGGCG CGCATCGGCG GCGGCCCCAT CATCATCAAT TCCTCGCGTG CGGTGCTCTA TGCGTCGCAG GGCGACGACT TCGCTGCTGC CGCGCGCACC GCCGCCCAGG CCACGCGCCA GACGCTGCAA GACGCAGCCG CCGCCTGA
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Protein sequence | MTFLDMLRNA TAQNQSMLCV GLDPEPSRFP AAMRGDASKI YDFCAAIVDA TADLVNSFKP QIAYFAAHRA EDQLEKLMAH MRAVAPHVPI ILDAKRGDIG STAEQYAKEA FERYGADAVT LSPFMGFDSI TPYLQYEGKG AFLLCRTSNP GGDDLQAQRL ADLPGQPHLF EHVARLAQGP WNTNGQLGLV VGATRPQEIE RVREFAPSLP LLIPGVGAQG GDAVATVKAA RIGGGPIIIN SSRAVLYASQ GDDFAAAART AAQATRQTLQ DAAAA
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