| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0811 |
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| Symbol | paaB |
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| ID | 5746365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 905418 |
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| End bp | 905723 |
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| Gene Length | 306 bp |
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| Protein Length | 101 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641295891 |
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| Product | phenylacetate-CoA oxygenase subunit PaaB |
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| Protein accession | YP_001561842 |
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| Protein GI | 160896260 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3460] Uncharacterized enzyme of phenylacetate metabolism |
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| TIGRFAM ID | [TIGR02157] phenylacetate-CoA oxygenase, PaaH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.323223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCCG TCGAACAGAA CATCACCAAC GAATGGCCGC TGTGGGAAGT CTTCGTCCGC
AGCAAGGCCG GCCTGGACCA CAAGCACTGC GGCAGCCTGC ATGCGGCCGA CCCGCAGATG
GCGCTGCAGA TGGCGCGCGA TGTCTACACG CGGCGCCAGG AGGGCGTGAG CGTCTGGGTG
GTGCGCTCGG ACCAGATCGT GGCCAGCGAC CCCGGCGACA AGGACATGTT CTTCGACCCG
GCCCAGGACA AGGTCTACCG CCATCCGACC TTCTACCAGC TGCCGCCCTC GGTGGACCAC
ATGTGA
|
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| Protein sequence | MTAVEQNITN EWPLWEVFVR SKAGLDHKHC GSLHAADPQM ALQMARDVYT RRQEGVSVWV
VRSDQIVASD PGDKDMFFDP AQDKVYRHPT FYQLPPSVDH M
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