| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0804 |
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| Symbol | mnmA |
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| ID | 5746358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 894920 |
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| End bp | 896038 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641295884 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001561835 |
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| Protein GI | 160896253 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAC ACCGCGTCGT GGTGGGCCTG TCGGGCGGTG TGGACTCCGC TGTCACGGCC
CATCTCCTCA AGCAACAGGG CCATGAAGTG GTCGGCATCT TCATGAAGAA CTGGGAAGAT
GACGACGACA GCGAATACTG CTCGTCCAAT GTCGATTTCG TCGATGCCGC CGCCGTGGCC
GACGTGGTCG GCATCGAGAT CGAGCATGTG AACTTCGCCT CCGAGTACAA GGACCGCGTC
TTCGCCGAGT TCCTGCGCGA GTACCAGGCC GGCCGCACGC CCAACCCCGA CGTGCTGTGC
AATGCCGAGA TCAAGTTCAA GGCCTTCCTG GACCACGCCA TGCGCCTGGG CGCCGAGAAG
ATCGCCACGG GCCACTACGC CCGCGTGCGC CAGAACCCCG ACACGCAGCT GTTCGAGCTG
CTCAAGGGGC TGGACCCGGC CAAGGACCAG AGCTACTTCC TGCACCGCCT CAACCAGGCT
CAGCTGTCCA GGTCCATGTT CCCCGTGGGC GAGCTGAAGA AGACCGAGGT GCGCCGCATT
GCCGAGGAGA TCGGCCTGCC CAACGCGAAG AAGAAGGACT CCACGGGCAT CTGCTTCATC
GGAGAGCGGC CGTTCCGCGA CTTCCTGAAC CGCTACATCA GCAAGGAGCC CGGCAACATC
CTCGACGACC GCAACCGCAA GCTGGGCAAG CATGTGGGCC TGTCGTTCTA CACGCTGGGC
CAGCGCTCGG GCCTGGGCAT CGGCGGCGTC AAGGAAAAGG GCGCGCCGCG CGGCGGCGGC
GACCATGATC CCTGGTTCGT GGCGCGCAAG GAGCTGGACA CCAACACGCT GCGCGTGGTG
CAGGGCCATG ACCACCCCTG GCTGCTGTCG CAGTCGCTGC TGGCCGACCA GGTCAGCTGG
GTGGCCGGCC ACGCGCCCGC CGAGGGCAAG GCCTACGGCT CCAAGACGCG CTACCGCCAG
CCCGACTCGC CGGCCCTGAT CTCGGGCGCC ACGCCCGAGG GCTTCCGGCT GGATTTTCCC
GAGCCGCAAT GGGCCGTCAC GCCCGGCCAG TCGGCCGTGC TCTACGACGG CGACGTGTGC
CTGGGCGGCG GCATCATCGC GGCGGTGGAT CCGCACTGA
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| Protein sequence | MTKHRVVVGL SGGVDSAVTA HLLKQQGHEV VGIFMKNWED DDDSEYCSSN VDFVDAAAVA
DVVGIEIEHV NFASEYKDRV FAEFLREYQA GRTPNPDVLC NAEIKFKAFL DHAMRLGAEK
IATGHYARVR QNPDTQLFEL LKGLDPAKDQ SYFLHRLNQA QLSRSMFPVG ELKKTEVRRI
AEEIGLPNAK KKDSTGICFI GERPFRDFLN RYISKEPGNI LDDRNRKLGK HVGLSFYTLG
QRSGLGIGGV KEKGAPRGGG DHDPWFVARK ELDTNTLRVV QGHDHPWLLS QSLLADQVSW
VAGHAPAEGK AYGSKTRYRQ PDSPALISGA TPEGFRLDFP EPQWAVTPGQ SAVLYDGDVC
LGGGIIAAVD PH
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