| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0744 |
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| Symbol | |
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| ID | 5746298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 825503 |
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| End bp | 826798 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641295824 |
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| Product | spermidine synthase |
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| Protein accession | YP_001561775 |
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| Protein GI | 160896193 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase
[COG1586] S-adenosylmethionine decarboxylase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase
[TIGR03330] S-adenosylmethionine decarboxylase proenzyme, Bacillus form |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGGAC TGCACCTGAC CGCCGATCTC TACCAATGCC AGGGCGACGC GCGCCACATG
CTTGACGCCG ACGCCATCGC CGCCCTGTGC CGCGCACAGA CCGCGCAGGC CGGCCTGACC
CTGGTGGAGG ACCGCTGGGT CAAGTTCCCG GACTACCAGG GCCAGCCCGG CGGCGTCACC
GGCACCGTGC TGCTGGCCGA ATCGCACCTG GCCATACACA CCTGGCCCGA GACCGGCTGC
GTCACCGTCG ATGTCTACGT CTGCAACTTC TCCGCCGACA ACTCGGGCAA GGCCCGCGCG
CTGATGGAGG GCGTGATCGC CGCCTACGCG CCGGGCCGCG TGGTGCGCCA GCACCTGATG
CGCGGCGACA TCGGTTCCGG CGCCCAGGCC ACGGCGGCGG CCGATGAGGG CGATTGGGCG
CTGGAGGCGC TCACGCCCCA TGCGCGCTTT GGCTGGCGCG CCACGCGGCG CGAAACCGTG
CAGACGCCCC ATCAGGAACT GGAGCTGCTG CACACGCCGC AGTTCGGCAA GGTGCTGCGC
CTGGATGGCC GCTTCATGAC CTCCGAAGGC GAGGAATTCT TCTACCACGA GGCCCTGGTC
CATCCCGCTG CCCTGGCCCA CCCGGCGCCG CGCAAGGCGC TGATCCTGGG CGGTGGTGAT
GGCGGCGCGG CCGAGGAGCT GCTCAAGCAC CCGTCCATGG AGCAGGTGGT GGTGGCCGAG
CTGGACGAGG CCGTGGTCCA GGCTGCGCGC ACGCACCTGC AGCAGGTGCA CTGGGGCGTG
TTCGATGACC CGCGCCTGCA ACTGCGCATC GGCGATGGGA TGGCCATGGT GGAGCGCACC
GAGGAGCGTT TCGACCTCGC GCTCATGGAC CTCACCGACC CCGACACGCC TGCCAGCGCG
CTGTACTCCG ACCAGGCCCT GGCGCGCATG AAGCGCGTGC TGGCGCCGGG CGGCGCCCTG
GTGCTGCACC TGGGCAGCCC CGTCTTCCAT GGCGAGCAGG TGGCGCGGCT GGTGGCCAGC
CTGCGCGAGC GCTTTGCCAT CGTGCGCTGC TACGGCCTGT ACATCCCCCT GTACGGCGCC
TACTGGGGCC TGGCCGTGGC CTCCGACACG CTGGACGCGG CGGCGCTGCC CCCCGCCCAG
CTGCGCCAGC GCCTGGCCGA GCGCCGCCTG CCCGACCTGC GCTACTACAA CGCCGAAGTG
CACCCCGCAC TGTTCGCGCT GCCCAACTAT TACCGCGACC TGGTGCAGCC CGCGCCCCTG
GCGGCGCTGC CCGCGCGCGC GGTCCGCGTC GCCTGA
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| Protein sequence | MHGLHLTADL YQCQGDARHM LDADAIAALC RAQTAQAGLT LVEDRWVKFP DYQGQPGGVT
GTVLLAESHL AIHTWPETGC VTVDVYVCNF SADNSGKARA LMEGVIAAYA PGRVVRQHLM
RGDIGSGAQA TAAADEGDWA LEALTPHARF GWRATRRETV QTPHQELELL HTPQFGKVLR
LDGRFMTSEG EEFFYHEALV HPAALAHPAP RKALILGGGD GGAAEELLKH PSMEQVVVAE
LDEAVVQAAR THLQQVHWGV FDDPRLQLRI GDGMAMVERT EERFDLALMD LTDPDTPASA
LYSDQALARM KRVLAPGGAL VLHLGSPVFH GEQVARLVAS LRERFAIVRC YGLYIPLYGA
YWGLAVASDT LDAAALPPAQ LRQRLAERRL PDLRYYNAEV HPALFALPNY YRDLVQPAPL
AALPARAVRV A
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