Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0744 |
Symbol | |
ID | 5746298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 825503 |
End bp | 826798 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641295824 |
Product | spermidine synthase |
Protein accession | YP_001561775 |
Protein GI | 160896193 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase [COG1586] S-adenosylmethionine decarboxylase |
TIGRFAM ID | [TIGR00417] spermidine synthase [TIGR03330] S-adenosylmethionine decarboxylase proenzyme, Bacillus form |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGGAC TGCACCTGAC CGCCGATCTC TACCAATGCC AGGGCGACGC GCGCCACATG CTTGACGCCG ACGCCATCGC CGCCCTGTGC CGCGCACAGA CCGCGCAGGC CGGCCTGACC CTGGTGGAGG ACCGCTGGGT CAAGTTCCCG GACTACCAGG GCCAGCCCGG CGGCGTCACC GGCACCGTGC TGCTGGCCGA ATCGCACCTG GCCATACACA CCTGGCCCGA GACCGGCTGC GTCACCGTCG ATGTCTACGT CTGCAACTTC TCCGCCGACA ACTCGGGCAA GGCCCGCGCG CTGATGGAGG GCGTGATCGC CGCCTACGCG CCGGGCCGCG TGGTGCGCCA GCACCTGATG CGCGGCGACA TCGGTTCCGG CGCCCAGGCC ACGGCGGCGG CCGATGAGGG CGATTGGGCG CTGGAGGCGC TCACGCCCCA TGCGCGCTTT GGCTGGCGCG CCACGCGGCG CGAAACCGTG CAGACGCCCC ATCAGGAACT GGAGCTGCTG CACACGCCGC AGTTCGGCAA GGTGCTGCGC CTGGATGGCC GCTTCATGAC CTCCGAAGGC GAGGAATTCT TCTACCACGA GGCCCTGGTC CATCCCGCTG CCCTGGCCCA CCCGGCGCCG CGCAAGGCGC TGATCCTGGG CGGTGGTGAT GGCGGCGCGG CCGAGGAGCT GCTCAAGCAC CCGTCCATGG AGCAGGTGGT GGTGGCCGAG CTGGACGAGG CCGTGGTCCA GGCTGCGCGC ACGCACCTGC AGCAGGTGCA CTGGGGCGTG TTCGATGACC CGCGCCTGCA ACTGCGCATC GGCGATGGGA TGGCCATGGT GGAGCGCACC GAGGAGCGTT TCGACCTCGC GCTCATGGAC CTCACCGACC CCGACACGCC TGCCAGCGCG CTGTACTCCG ACCAGGCCCT GGCGCGCATG AAGCGCGTGC TGGCGCCGGG CGGCGCCCTG GTGCTGCACC TGGGCAGCCC CGTCTTCCAT GGCGAGCAGG TGGCGCGGCT GGTGGCCAGC CTGCGCGAGC GCTTTGCCAT CGTGCGCTGC TACGGCCTGT ACATCCCCCT GTACGGCGCC TACTGGGGCC TGGCCGTGGC CTCCGACACG CTGGACGCGG CGGCGCTGCC CCCCGCCCAG CTGCGCCAGC GCCTGGCCGA GCGCCGCCTG CCCGACCTGC GCTACTACAA CGCCGAAGTG CACCCCGCAC TGTTCGCGCT GCCCAACTAT TACCGCGACC TGGTGCAGCC CGCGCCCCTG GCGGCGCTGC CCGCGCGCGC GGTCCGCGTC GCCTGA
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Protein sequence | MHGLHLTADL YQCQGDARHM LDADAIAALC RAQTAQAGLT LVEDRWVKFP DYQGQPGGVT GTVLLAESHL AIHTWPETGC VTVDVYVCNF SADNSGKARA LMEGVIAAYA PGRVVRQHLM RGDIGSGAQA TAAADEGDWA LEALTPHARF GWRATRRETV QTPHQELELL HTPQFGKVLR LDGRFMTSEG EEFFYHEALV HPAALAHPAP RKALILGGGD GGAAEELLKH PSMEQVVVAE LDEAVVQAAR THLQQVHWGV FDDPRLQLRI GDGMAMVERT EERFDLALMD LTDPDTPASA LYSDQALARM KRVLAPGGAL VLHLGSPVFH GEQVARLVAS LRERFAIVRC YGLYIPLYGA YWGLAVASDT LDAAALPPAQ LRQRLAERRL PDLRYYNAEV HPALFALPNY YRDLVQPAPL AALPARAVRV A
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