| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0729 |
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| Symbol | |
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| ID | 5746283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 806465 |
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| End bp | 807724 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641295809 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001561760 |
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| Protein GI | 160896178 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.613371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTCA TCATGCTTTT CGTCTTCATG GCGGGCGCCG TGATCGCCAT GCCCATTGCC
CACGCGCTGC TCATGGGCGC CATGGCGGCG GCGGCCACCT CGGACCGCGT GCCGCTGGAC
CTGCTGGTGC AGCAGATGGT GGCCCAGGTG CAGAGCTTTC CGCTGATCGC CATCCCGTTC
TTCATGCTCA CCGGCTCGCT GATGATGGGC GGGCGCCTGG GCGAGGCCCT GGTGGGCGTG
CTGTCGGCGC TGATAGGGCG CTTTCACGGC GGGCCGGCCC AGGTGGGGGT GATGTCGTCC
ACGCTGTTCG GCGGGGTGTC GGGCTCGGCC GTGGCCGATG CCTCGGCCAT CGGCTCGCTG
ATGATCCCGT GGCACAGGCG GCTGGGCTAT CCGCCCGCGT TCTCGGCGGC CACGCTGGCG
GCGGCGGCCA CCATCGACAT CCTGATCCCG CCGTCGATTC CCATGATCCT GTTCGCGCTC
AGCGCCAATG CATCGATTGC GGCGCTGTTC GTGGCGGGCA TCGTGCCGGG GCTGCTGATG
TGCGCGGGCT TCATGGGCGT GTGCTGGTGG GTGGGCCGCA GCCGCGGCTT TCCGCGCGAC
ACCACGCCCT TTGCCTGGCC CGCCTTCCGT CGCCACCTGC TGTACGCCAG CCCGGCCCTG
CTGCTGCCGG TGCTGATCAT CGTGTTCCTG CGCTTCGGCA TTGCAACGCC CACCGAGGTG
GCCGTGCTGT CCACGCTGTA TGCGGGCCTG GTGTCGGCCG CCATCTACCG CGACCTGGGC
TGGCGCCGGC TCAACGATGC GGTGGTGCAT GCGGGCCTGG CCACGGGCGT GGTGCTGCTG
GTGATCATGG CCTCGTCGGC CATCGGCTGG CTGCTGACCT TCGACCGCAT GCCCGATGGG
GTCGTGCACT GGGTGCAGTC GCATGTGCAT TCGGCCTGGC TGGTGATCGT GCTGATGAAC
CTGCTGATGC TCTTCATCGG CATGTTCATC GACCTGCCGG CCGCCGTGCT GCTGCTCACG
CCGGTGTTCG TGCCGCTGGC CCAGAGCATC GGCATGGACA TGACCCAGCT CGGAATCATG
ATGGTCGTGA ACCTGGCCCT GGGGCTGTAC ACGCCGCCCG TGGGCACGAC GCTGTTCATC
ACGAGTTCGC TGGCCCGGGT CAAGGTGGGC CAGACCGTGC GCGAGCTGAT TCCCTTCTAC
CTGGTGGCGC TGGCCGTGCT GGCGCTGGTG TCCTATGTGC CGGCCAGCAT CCTGCGCTGA
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| Protein sequence | MSFIMLFVFM AGAVIAMPIA HALLMGAMAA AATSDRVPLD LLVQQMVAQV QSFPLIAIPF
FMLTGSLMMG GRLGEALVGV LSALIGRFHG GPAQVGVMSS TLFGGVSGSA VADASAIGSL
MIPWHRRLGY PPAFSAATLA AAATIDILIP PSIPMILFAL SANASIAALF VAGIVPGLLM
CAGFMGVCWW VGRSRGFPRD TTPFAWPAFR RHLLYASPAL LLPVLIIVFL RFGIATPTEV
AVLSTLYAGL VSAAIYRDLG WRRLNDAVVH AGLATGVVLL VIMASSAIGW LLTFDRMPDG
VVHWVQSHVH SAWLVIVLMN LLMLFIGMFI DLPAAVLLLT PVFVPLAQSI GMDMTQLGIM
MVVNLALGLY TPPVGTTLFI TSSLARVKVG QTVRELIPFY LVALAVLALV SYVPASILR
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