| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0724 |
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| Symbol | |
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| ID | 5746278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 800841 |
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| End bp | 801887 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641295804 |
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| Product | porin |
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| Protein accession | YP_001561755 |
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| Protein GI | 160896173 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCA ATCGTATATT GGCGGCCGCA CTGCCCGTCA TTTCGCTGGC GGCCAGCGCG
CAGTCATCCA TCACCCTGTT CGGCATCGTT GACGTCAATG GGCGCTACGT GAAGAACAGC
GATCTGCCCA GCAACATGAC CATGAACAAC AGCGGGCTGT CATCGGGCCG GTTTGGCTTT
CGCGGCACCG AGGATCTGGG CGGCGGATTG AGGGCCGAGT TCTGGCTGGA GTCAGACCTC
TATGCCGACA CCGGCACGAC AAACGCCAAT GGCAAGTTCT TCCAGCGCCG CTCCACGGTG
AGCTTGGCGG GCGGCTTCGG CGAGCTGCGC CTGGGCCGCG ATTTCACGCC GGCCGCGCAA
AATCCCACCA AGTTCGACCC GTTCAACGTG ATCGGCCTGG CAAACTCCAA CATCATCAGC
CGCCTGCCCG GCACCTTCTC GAACTACTAC CGCAGCGACA ACGCCATCCA GTACTTCACT
CCCAAATGGA GCGGTTTCCA GGCAGAAGTG ATGTATGCCC TGGACGAAGA CCCGGTGAGC
AGCGCCGGCC GCCATTTCGG CAGCCGCCTG ACCTACGACA GCGGCCCTCT GAACCTGGCG
CTCACCTATG GCTCGACCGA TGTGAACGCT GCGGGCACCA AGCTCAAGCA ATACGGCGCA
GGCGCCTCCT ACGATTTCGG CTTTGCCAGG CTGATGGGGT ATTTCCAGCG CGAGGACCTG
CCCTATGGCA CCTATGGAAC CCGCATCGCG GGCTCCGAGG ACCGCTGGCA GGTCGGCCTT
ACCGTGCCCG TGGGGGCGAA CTACATCCGC GCCTCCTATG TGCGCACCGA TTCGCGCCGT
GGGCCGGTGG CCTTCAATGG CAGCGATGCC AACAGGTATG CGATCGGCTA TGTGCACAAC
CTGTCGCGGC GCACGGCACT GTACGGAACC CTTGCACGCG TGACCAACAA GGGCGGGGCC
AATTTCAGCC TCAATGGCGG CACCACCGGA CTGGCTGCGG GCGGCAGCTC CACAGGCGCT
GAACTCGGCA TGCGCCACAG TTTCTGA
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| Protein sequence | MKFNRILAAA LPVISLAASA QSSITLFGIV DVNGRYVKNS DLPSNMTMNN SGLSSGRFGF
RGTEDLGGGL RAEFWLESDL YADTGTTNAN GKFFQRRSTV SLAGGFGELR LGRDFTPAAQ
NPTKFDPFNV IGLANSNIIS RLPGTFSNYY RSDNAIQYFT PKWSGFQAEV MYALDEDPVS
SAGRHFGSRL TYDSGPLNLA LTYGSTDVNA AGTKLKQYGA GASYDFGFAR LMGYFQREDL
PYGTYGTRIA GSEDRWQVGL TVPVGANYIR ASYVRTDSRR GPVAFNGSDA NRYAIGYVHN
LSRRTALYGT LARVTNKGGA NFSLNGGTTG LAAGGSSTGA ELGMRHSF
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