| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0698 |
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| Symbol | |
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| ID | 5746252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 774815 |
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| End bp | 777193 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641295778 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_001561729 |
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| Protein GI | 160896147 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCC GAGTCACCAT ACACACGCCA TTGGGCGAGC AGCTGCATTT CCGTGAATTG
CGCGGCCAGG AAAACATCAG CCAGCTCTTC AGCCTCGATG TGGAAATGCT CAGCGAAAGC
GAAAGCATCG ATCCCAAGGC CCTATTGGGC AAAAACGCCA CCATAGAAAT AGAAACCCAG
GGCGGCGGCA GGCGCTTCAT CGACGGCATC GTCACCCGCT TTGGCATGCA GGGCCAGGAC
CACCGCCACT ACGCCTACAA GGCGCGCCTG AGCCCCTGGC TGTGGCTGGC CACGCGCAAG
AGCGACTTTC GCATCTTCCA GAACCAGACC GTGCCCGACA TCATCGAGCA GGTATTGGGC
GTCTATGGCC ATCCATTGCA AAGGAAACTC ACGCGCGCCT ATCGCAGCTG GGACTACTGC
GTTCAATACA ACGAAAGCGA TTGCGACTTT GTCTCGCGAT TGATGGAGCA CGAAGGCATC
TACTACCACT TCGCGCATGC CATGGGAGAA CACACCCTGG TGCTGTGCGA CGACATCATT
GCCTCGCACG GCGTATTGCC CGGGGGCGCC TCCATTCCCT TTTATCCCCC GGAAAAAGCG
GCCGCAGGCG ATCAGGAAAA CATCCACGCC TGGCAGCTGG AGCAGGAAAT CAAGCCGGGC
CGCCATTACA TCGACGACTA CGACTTCAAA AAGCCCCGGG CCGAACTGTC CCACATGCGC
CGCGATCCAC CGGGCCATGC GCACGACGGC CATGAAACCT ACGAATGGCC GGGCGGCTAC
ACGGAGTACG GCGATGGAGA GGCCTACATC CGCGTGCGCC TGAAGGAAAG CCTCACGGGC
CAAAGCCGGG TGCGGGGCCA GTCCTGCCAC CGGGCGCTGG CCACGGGCTA CACCTTCAGC
CTCTACAACT ACCCGCGCGG TGACCAGAAC CAGCAGTACC TGATCACCGG CCTGAGCTAC
CACCTGAAAG AAAACCCTCG CGTCAGCGCG ATCACCAGCG TACGTGGCGT CCCATCCGCA
CCGAGTGCCC GGGACGGCGC CAAGGAAGAA GGCTCCTTCC AGCGCTACGA GTTGCAGGCC
CAGCCCACGA GTCTTGCCTA CACCCCTGCA CGCACCACGC CCAAGCCGCG TACCACCGGC
CCGCAGACCG CCGTCGTCGT GGGTCCTGCT GGGCAGGAGA TATGGACCGA CGAATACGGC
CGCATCAAGG TGCAGTTCCA CTGGGACCGC CTGGGCAAGA AGGACCAGAA CTCCGGCTGC
TGGATACGTG TTGCCACCCA ATGGGCGGGC ACAGGCTTTG GCGTTGTCTC CATCCCGCGC
ATCGGCATGG AAGTCATCGT GGACTTCCTC AATGGCGACC CCGACTACCC CATCGTCACG
GGCTGCGTCT ACAACGCGGC CAACATGCCG CCCTGGGCGC TGCCGGCCAA TGCCACGCAA
TCGGGCATCA AGACGCGGTC GAGCAAGGGC GGCGCACCGG GTGCCGGCAT GAAGAACGGC
CAGGGCGACG CCAACGCCAT CCGCTTCGAG GACAAGGCCG GGCAGGAGCA GCTGTGGCTG
CACGCGCAAA AGGACCAGCT CACCGAAGTC GAGAACGACG AAGACAAATG GGTGGGCAAC
GACCGGCGCA AGACGGTGGA CCGGGACGAG ACCAGCGTGA TCCACCGCGA CCGCACGGAG
ACCGTGGACC GCAACGAGAA GATCGACGTG CACGGCTGGC GCACGGAGGT GGTGGACCTG
GACGAGACCC TCACCGTCCA CCAGAACCGC ACGCGCACGG TGGACCTGGA TGAAAGCATC
CGCATCTGCA AGAACCGCAC GAAAACCGTG GATGCCAATG GGCGCGACAG CATCGGCCGC
AACTGGACCC TGGCCACGGG GCGCATGAAA TCCGAAACCG TGGGCATCGG CTACACGCAG
GGCACGGGCC TGTTCAAGAT GGTTACCGTG GGGTGTGCCT ACAACCTCAA CGTAGGCGCG
GTGCTGATGA GCAATGTGGG TGTCCTGCGA AGCGACAGCG TGGGGATGGA CTGGAGCCGG
ACCGTGGGGC GCAACCGCAG CGCGCAGATT GGCAACGATG AAGGCCTCGT CGTGGGCCAC
AACCGCAGCA GCACCATCCA GAACAACGAC AGCACCGAGG TTGGGCAGGA CCAGGCAGTC
AACGTCGGCA ACGACCACGC GCTGCGGGTG GGCGCCAACA GCCTGCTCGA TGCGGGCGGA
CAGCTGGCCC TGGCGGCGGG CACCACGCTG ACGGTCGATG GGCAACAGGT CATCGTCACC
GGCACCCAAA GCATCCGGCT GCAATCAGGA GCGAGCTCCA TCGAGATCTC TGCGGCCATG
GTCGAGATCA AGTCGCCGCT GGTGAAGATC AACTGCTGA
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| Protein sequence | MTRRVTIHTP LGEQLHFREL RGQENISQLF SLDVEMLSES ESIDPKALLG KNATIEIETQ
GGGRRFIDGI VTRFGMQGQD HRHYAYKARL SPWLWLATRK SDFRIFQNQT VPDIIEQVLG
VYGHPLQRKL TRAYRSWDYC VQYNESDCDF VSRLMEHEGI YYHFAHAMGE HTLVLCDDII
ASHGVLPGGA SIPFYPPEKA AAGDQENIHA WQLEQEIKPG RHYIDDYDFK KPRAELSHMR
RDPPGHAHDG HETYEWPGGY TEYGDGEAYI RVRLKESLTG QSRVRGQSCH RALATGYTFS
LYNYPRGDQN QQYLITGLSY HLKENPRVSA ITSVRGVPSA PSARDGAKEE GSFQRYELQA
QPTSLAYTPA RTTPKPRTTG PQTAVVVGPA GQEIWTDEYG RIKVQFHWDR LGKKDQNSGC
WIRVATQWAG TGFGVVSIPR IGMEVIVDFL NGDPDYPIVT GCVYNAANMP PWALPANATQ
SGIKTRSSKG GAPGAGMKNG QGDANAIRFE DKAGQEQLWL HAQKDQLTEV ENDEDKWVGN
DRRKTVDRDE TSVIHRDRTE TVDRNEKIDV HGWRTEVVDL DETLTVHQNR TRTVDLDESI
RICKNRTKTV DANGRDSIGR NWTLATGRMK SETVGIGYTQ GTGLFKMVTV GCAYNLNVGA
VLMSNVGVLR SDSVGMDWSR TVGRNRSAQI GNDEGLVVGH NRSSTIQNND STEVGQDQAV
NVGNDHALRV GANSLLDAGG QLALAAGTTL TVDGQQVIVT GTQSIRLQSG ASSIEISAAM
VEIKSPLVKI NC
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