Gene Daci_0692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0692 
Symbol 
ID5746246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp767496 
End bp768620 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content73% 
IMG OID641295772 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_001561723 
Protein GI160896141 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTGC TGGACAGCGT GCGCGTGCTG GAGATTGGCG GCATTGGCCC GGGGCCGTTT 
TGCGCCATGC ATCTGGCGGA CCTGGGGGCC GATGTGATCT CCATCGTGCG GCCCGAGGCG
GAACCCGCCG CCGCCTCAGC CGCCTCCGCG CTGTCGCGCG GCAAGCGCTC GGTGTTCGCC
GATCTCAAGT CGCCCGAAGG ACGTGACCTG GTGCTGGCCC TGGTGCGCGA TGCCGATGCG
CTGATCGAAG GCATGCGGCC CGGCGCCATG GAGCGCCTGG GCCTGGGGCC CGAGGCCTGC
CAGGCCCTCA ACCCGCACCT GGTCTATGGC CGCATGACGG GCTGGGGCCA GGACGGCCCG
CTGGCCCAGG CAGCTGGCCA CGACAACAAC TATGCGGCCG TCTCGGGCGC GCTGTGGGGG
TGCGCGCCGG CCGGCGCGCG ACCGGTCTCG CCCTTTGCCA CCCTGGGCGA CATCGGCGGC
GGCGCCATGT ACCTGATGAC GGGGTTGCTG GCCGGCATCG TGCAGGCGCG CGCCACGGGG
CGCGGCACCG TGGTGGACGC GGCCATCGTC GATGGTGCGG CGCACATGCT CAACCTCATG
CTGCATGCGC GCCAGCGCGG GCTGGTGGCC GACGAGCGCG GCCACAGCAT CCATGACAGT
GCGCCGTTCT ACGAAACCTA TGCCTGTGCC GATGGCGGCT TCATCACCGT GGGCGCCATC
GAGCCGCAGT TCCACGCCCT GCTGCTGGAC AGGCTGGGCC TGGCCGATGC CGCAGCGTTC
CAGGGCCCGC AGTGGGACCG CGCAGCCTGG CCTGCGCGGC GCGCGCAGCT GCAGGCGCTG
TTCGCCTCCC GGCCCCGCGC GCACTGGCAG CAATTGCTGG AGGGCAGCGA TGCCTGTTTC
GGCGCCGTGC TCAGCCCTGT GGAAGCAGCC CGCCACCCGC ACCTGCAGGC GCGCGGCGTC
TACCTGCAGC CCGAAGGCGG CGCCCTGCAG GCCAGCCCCG CGCCGCGCTT TGACGGCCAG
GCCTATGCGC CGGGCCCTGC GAATGCCGCA GGCTCCGACA CCGCCAGCGT GCGGGAGAAG
GTGAGCGCAG GGCGCGCGCA GGAAGTCTGG CGCAGCGCCC GCTGA
 
Protein sequence
MKVLDSVRVL EIGGIGPGPF CAMHLADLGA DVISIVRPEA EPAAASAASA LSRGKRSVFA 
DLKSPEGRDL VLALVRDADA LIEGMRPGAM ERLGLGPEAC QALNPHLVYG RMTGWGQDGP
LAQAAGHDNN YAAVSGALWG CAPAGARPVS PFATLGDIGG GAMYLMTGLL AGIVQARATG
RGTVVDAAIV DGAAHMLNLM LHARQRGLVA DERGHSIHDS APFYETYACA DGGFITVGAI
EPQFHALLLD RLGLADAAAF QGPQWDRAAW PARRAQLQAL FASRPRAHWQ QLLEGSDACF
GAVLSPVEAA RHPHLQARGV YLQPEGGALQ ASPAPRFDGQ AYAPGPANAA GSDTASVREK
VSAGRAQEVW RSAR