Gene Daci_0689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0689 
Symbol 
ID5746243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp764827 
End bp765651 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content75% 
IMG OID641295769 
ProductIclR family transcriptional regulator 
Protein accessionYP_001561720 
Protein GI160896138 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.933931 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCA CTGCTGCCTC CGAGATCGAC GAGCCCGCGC CGCCGCGCGA AAGGCGCCAG 
CGCGTGCAGG CTGCCGAGAC CTGCCTGGCC GTGCTCAAGG CCCTGGCCAC GCTGGGCGGA
CGCGCCAGCC TCACGGCCAT CGCGGGCGCG GTGGAGGAAA GCCCGGCCAA GGTCCACCGC
TACCTGGCCA GCCTGATGGC CGAGGGGCTG GTGGAGCAGG ACCGTGGCGG CACGCAGTAC
GCGCTGGCGG CCGAGGCCAT GCGCGTGGGC CTGGCCGCCA TGCGGCAGTC CGACCCCATC
CGCCTGGCCG AGCCGGCCCT ATTGCACCTG CGCGAGGCCT TGCAGGTCAC CAGCTTCGTG
GCCGTGATGG GCAACCTGGG GCCGACCATC GTGCGCTTCG AGGAGCCGGG CCTGCCGGTC
ACCGTCAATG TGCGCGTGGG CTCGGTGATG TCGCTGCTGT GGTCGGCCAC GGGGCGCGCC
TTCTTCGCCT TCATGGACGA CGATGCCCGC GTGGATGCGC TGCTGGCCCG GGAGCTGGCC
GAGGCGCCGG CCGCGCGGCG CGCGCTGCTC GATGGCGCGG ACCCGCTGGG CACGCTGCGC
CGCGAGATCC GCGCTGCGGG CTGCGCCTCG GTGCGCGACG TCAACCTGCC GGGCATCAGC
GCCGTGGCGG CGCCGCTGCA CGACTACACG GGCCATGTGG TGGGCGTGCT GTGCGCGCTG
GGCGCCAGCG GTGGCTTCGA CCCGGACCCG CAGGGCGCGG TGGCCCGGGC CCTGCGCGCC
GAAGCGGCGC GCGTCAGCGC CTCGCTGGGC TATCTGCCCG GCTGA
 
Protein sequence
MTSTAASEID EPAPPRERRQ RVQAAETCLA VLKALATLGG RASLTAIAGA VEESPAKVHR 
YLASLMAEGL VEQDRGGTQY ALAAEAMRVG LAAMRQSDPI RLAEPALLHL REALQVTSFV
AVMGNLGPTI VRFEEPGLPV TVNVRVGSVM SLLWSATGRA FFAFMDDDAR VDALLARELA
EAPAARRALL DGADPLGTLR REIRAAGCAS VRDVNLPGIS AVAAPLHDYT GHVVGVLCAL
GASGGFDPDP QGAVARALRA EAARVSASLG YLPG