Gene Daci_0688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0688 
Symbol 
ID5746242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp763686 
End bp764666 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content71% 
IMG OID641295768 
Producthypothetical protein 
Protein accessionYP_001561719 
Protein GI160896137 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.502545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAGC GCCTTTTCCT CACCTCACTG GCCGCTGGCC TGCTATCGGC CGCCGCCCTG 
CCCGGCGCGC TGGCCCAGGA CGGATTCCCC AGCAGGAACG TGCGCTGGAT CGTTCCCTAC
GCGGCCGGCG GCGGCTCGGA CTTCCTGGCC CGCACCATAG GCCAGGCCTG GGGCGGCCAG
GTGCACCAGC CCATCGTGGT GGACAACCGC CCGGGCGGCA ACACGGCCAT AGGTGCCTCG
GAAACCGCGC GCGCCGCCGC CGATGGCTAC ACCGTGCTGT CGGCCGACAA CGGCACCCTG
GTCTTCAATC CAGTGCTCTA CAAGAGCCTC AGCTACAACC CCGCCAGGGA CCTTGCGCCG
GTCACGCTGA TGGGCCGCTT CCCGATGATC CTGGTGGCCG GCCCCGGCAT GGCAGCGGCC
ACGGCCAAAG ACTTCCTGGC CCAGGCGCGC ACCAGCAAGG ACGGCGTGAA CTACGCCTCG
GCCGGTGCCG GCAGCCCGCA CCACCTGGCC ATGGAACTGC TCAGGGTGGA GGCCGGCCTG
AAGCTGGTGC ACGCCCCCTA CAAGGGCGCG GCACCGGCCC TGGGCGACGT GGCTGGCGGC
CAGGTGCCCG TGATGATGGT GGACCTGGCC GCGGGCGCAG GCTTCATCAA GGGCGGCAAG
GTCCGGCCGC TGGCCGTGGC CAACGCCACG CGCCTGCCCC AGTTGCCCGA CGTGCCCACC
TTCGCCGAGC TGGGCCTGCC CAAGGTGCAG GCCGCCGCCC TGGTGGGGCT GGTGGCGCCC
GCCAGGACCC CGGCCCCGGT CATCGCGGCC CTGCACAGGC AGGTCGTGGC CGCGATCAAC
GAGCCCGCCG TGCGCCAGAA GCTCGTGGAT TTCGGCGTGG AGCCCGTGGG CAACACGCCC
GAGCAGTTCG CCGCGCTGCT GGCCAGCGAA AGCACGCGCT GGCACCAGCT GATCCGCGAC
CAGAACATCA CTTTGGATTG A
 
Protein sequence
MHKRLFLTSL AAGLLSAAAL PGALAQDGFP SRNVRWIVPY AAGGGSDFLA RTIGQAWGGQ 
VHQPIVVDNR PGGNTAIGAS ETARAAADGY TVLSADNGTL VFNPVLYKSL SYNPARDLAP
VTLMGRFPMI LVAGPGMAAA TAKDFLAQAR TSKDGVNYAS AGAGSPHHLA MELLRVEAGL
KLVHAPYKGA APALGDVAGG QVPVMMVDLA AGAGFIKGGK VRPLAVANAT RLPQLPDVPT
FAELGLPKVQ AAALVGLVAP ARTPAPVIAA LHRQVVAAIN EPAVRQKLVD FGVEPVGNTP
EQFAALLASE STRWHQLIRD QNITLD