Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0660 |
Symbol | |
ID | 5746203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 721348 |
End bp | 723228 |
Gene Length | 1881 bp |
Protein Length | 626 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641295729 |
Product | ABC transporter related |
Protein accession | YP_001561691 |
Protein GI | 160896109 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.14515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.023928 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTGA TTACTTTGAT AGACGCCCAA CTGGCGTTCG GGCATGTGGC GCTTCTCGAC CACGCCCAGT TTTCCCTGGA GAGCGGCGAA CGTGTGGGCC TGATCGGTCG AAACGGCGCA GGGAAGTCCT CTTTGTTGAA GATTCTTGGC GGACTGGCCA AGGCCGATGA CGGCCAGGTC CAGACGCAGT CCGGTATCCG CATTACTTAT GTGGCGCAGG AGCCGGTGCT TGTGCCCGAG CAGACGATCT TCGAGTCGGC GTCCGCCGGC ATTGCCGAGG TGATCGCCGT GCGCGATCGC TATCTGGCGG GTGGCGAGGG CGAGGATCTC GATGCGCTGC AGTCCCAGAT CGAGGCCTAT GACGCCTGGA ATTGGGAGCA GCGCGTGGAA GAGACGCTGC AGCGGCTGCA CCTGGATCCC GACGCCCTGG TGGGCACGTT GTCCGGGGGG ATGAAGAAGC GCGTTGCGCT TTCCCAGGCG CTGGTGGCCC GTCCTGACGT GCTGCTGCTG GACGAGCCGA CCAACCACCT GGACCTGGAT GCCATCGAGT GGCTGGAGGA ACTGCTGCTG AACTTCAAGG GCAGCGTGGT GACCATTACC CACGACCGCT CCTTCCTGGA CCGCGTCTCC ACGCGCATCG TGGAGCTGGA TCGTGGAACG CTGCGCTCCT ATCCCGGCAA TTTCGTTCAG TACCAGCAAA CCAAGGAAGA TCAGCTGGCC CAGGAAGCCG TGATCAACGC CAAGGCCGAC AAGCTGCTGG CCCAGGAGGA GGTGTGGATA CGCAAGGGCG TGGAGGCGCG CCGCACGCGC AGCCAGAGCC GCATCGGCCG ATTGGAGCAG TTGCGGGCCA ACCGCGCTGC CCGCCGTGAT GTGCTGGGCG GGGTGAAGAT GGACATTGCC TCGGGCCGGG GCGATGGCTA CCAGGGCAAG ATCGTGGCCG AGCTGACCGA TGTGGCCAAG TCCTTTGGCG ACAAGCAGAT CGTCTCGCAT TTCAGCGCCA CCATCCTGCG CGGTGACAAG GTGGGACTGA TCGGGCCCAA CGGTGCCGGC AAGACGACGC TGCTCAAGAT GATTCTGGGC GAACTGGCGC CTGACAGCGG CAACGTGCGG CTGGGTGCGA ATCTGCAGGT GGCTTACTTC GACCAGATGC GGCACCAGAT CAATATGGAT GCCACGCTGG AGGACTTCAT CAGCCCCGGC AGCGAGTGGA TAGAGATCGG CAACCAGAAA AAGCACGTGA AGAGCTATCT GTCGGATTTC CTGTTCTCTC CGGCACGCGC TCACTCTCCT GTGCGTTCAC TGTCCGGCGG CGAGCGCAAC CGCCTGCTGC TGGCGCGCCT GTTTGCCCGC CCCGCGAATG TGCTGGTTCT GGACGAGCCG ACCAACGACC TCGATATCGA GACGCTGGAG ATGCTGGAAG ACCTGCTGCA GAACTACGAC GGCACGGTGT TCCTGGTCAG CCATGACCGC AGTTTCCTGG ACAACGTGGT CACCAGCACC ATTGCCTGGG AAGGGCCGGG CAAGTGGCGC GAATACGAAG GCGGCGTGCA GGACTGGCTG GACCAGTCGC GCCGCAGCCA GGATCTGGCC GAGGCTGCAC AGCCCAAGCC TGCCAAGGAA GAGGCCGCCA AGCCGACGGC GGTGCGCAGC GACAGCAAGC CCAAGCGCAA GCTCAGCTAC AAGGAGCAGC GCGAGCTCGA TCAGTTGCCC GAGACCATTG CATCGCTGGA GGCGGAGCAG AAATCCATTC GCGAGGCCCT GGCCGACGGC TCGCTGTATG CCAACGACAA CTCCCGCGCC GTTCAGCTGC ACCAGCGCGA TGGCGAGATC GATGAGCAGC TGATGGAGGC GCTGGAGCGC TGGAGCGCCT TGTCCGAGTA A
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Protein sequence | MALITLIDAQ LAFGHVALLD HAQFSLESGE RVGLIGRNGA GKSSLLKILG GLAKADDGQV QTQSGIRITY VAQEPVLVPE QTIFESASAG IAEVIAVRDR YLAGGEGEDL DALQSQIEAY DAWNWEQRVE ETLQRLHLDP DALVGTLSGG MKKRVALSQA LVARPDVLLL DEPTNHLDLD AIEWLEELLL NFKGSVVTIT HDRSFLDRVS TRIVELDRGT LRSYPGNFVQ YQQTKEDQLA QEAVINAKAD KLLAQEEVWI RKGVEARRTR SQSRIGRLEQ LRANRAARRD VLGGVKMDIA SGRGDGYQGK IVAELTDVAK SFGDKQIVSH FSATILRGDK VGLIGPNGAG KTTLLKMILG ELAPDSGNVR LGANLQVAYF DQMRHQINMD ATLEDFISPG SEWIEIGNQK KHVKSYLSDF LFSPARAHSP VRSLSGGERN RLLLARLFAR PANVLVLDEP TNDLDIETLE MLEDLLQNYD GTVFLVSHDR SFLDNVVTST IAWEGPGKWR EYEGGVQDWL DQSRRSQDLA EAAQPKPAKE EAAKPTAVRS DSKPKRKLSY KEQRELDQLP ETIASLEAEQ KSIREALADG SLYANDNSRA VQLHQRDGEI DEQLMEALER WSALSE
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