| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0656 |
|---|
| Symbol | |
|---|
| ID | 5746199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 717947 |
|---|
| End bp | 718435 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641295725 |
|---|
| Product | CheW protein |
|---|
| Protein accession | YP_001561687 |
|---|
| Protein GI | 160896105 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0835] Chemotaxis signal transduction protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.211882 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTGA TCGCTAAGAC CGCAGAAGGC GTCGCCACCG GCGCGCGCGA GTACCTGACC
TTCCGCCTGG ACCAGGAGGA ATACGGCATC GACATCCTGA AGGTGCAGGA AATCCGCGGC
TACGAGCCGC CGACCCGCAT CGCCAATGCG CCGGAATTCA TCAAGGGCGT GGTCAATCTG
CGCGGCACCA TCGTGCCCAT CGTGGACATG CGGCTGAAGT TCAACTGCTC CCAGGTGGAA
TACAACAGCT TCACCGTCGT CATCATCCTG AACCTGCGCA ACCGCGTGGT GGGCATCGTG
GTGGACTCGG TCAGCGACGT GATGGAACTG GCTCCCGAAG CAGTGCGCCC CGCGCCGGAC
ATCGAAAGCG CCATCGACAG CGGCTGCATC CTGGGCCTGG GTTCCGTGGG CGAGCGCATG
CTCATCCTGC TGGACATCGA AAAGCTCATG AACAACGTGG ACATGGGCCT GGTCGCCTCG
GTCGACTGA
|
|---|
| Protein sequence | MSVIAKTAEG VATGAREYLT FRLDQEEYGI DILKVQEIRG YEPPTRIANA PEFIKGVVNL
RGTIVPIVDM RLKFNCSQVE YNSFTVVIIL NLRNRVVGIV VDSVSDVMEL APEAVRPAPD
IESAIDSGCI LGLGSVGERM LILLDIEKLM NNVDMGLVAS VD
|
|---|
| |