| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0655 |
|---|
| Symbol | |
|---|
| ID | 5746198 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 715633 |
|---|
| End bp | 717831 |
|---|
| Gene Length | 2199 bp |
|---|
| Protein Length | 732 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641295724 |
|---|
| Product | CheA signal transduction histidine kinase |
|---|
| Protein accession | YP_001561686 |
|---|
| Protein GI | 160896104 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.666621 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATC TACACCAGGA TGGGGCAGGA GCGGGCGCAG ACTTCGACCT GAGCCAGTTC
TATCAAATCT TCTTCGAAGA AGCGGCCGAG AACCTCGACC AGATGGAGCA GATGCTGCTG
AATCTGGATC TGTCAGCGGC CAATGACGAG GAACTCAACG GCATCTTCCG ATGCGCGCAC
TCGATCAAGG GCGGGGCGGC CACCTTCGGC TTTGCCGACG TGACCGAGCT GACGCACCGC
ATGGAGTCGC TGCTCGACCG GCTGCGCCGG CACGAGATCA CACCGATTCC GGAGATGGTC
GATGTGTTGC TGGAGTCGGC TGATGCCAGC CGCAGCCTGC TGGCACGCCA CCAGGCCGGC
AACGAGGGCG AGGCCCTGTC CACCACGGAT CTGGTGGCAC GCATCGAGAC GCTGGCGGAA
GGCCGCAGCG CCGTACCTGC AGCGGCAGTG CCGGCTCCCG CACCGACCCC GGCTCCAGCC
CCTGTGGCTG CGCCAGTGCA GGCTCCGGCC CCGGTTGCTG CAGCGCCTGT CTCGGGCGGC
GCCGTCGGCA CGGCACCCAG CAGCGGCGGA CGTTCGCTGC ATATCCTGAT CGGTCCGCTG
GAGCGCCTGG AGATGGCCGA GGCCATCAAG GAGCTGTTCC GCGACATTCC CGGCCTGGGA
CGCATCGAGG ACCTGGCCTG CGATCAGCCG CAAAGCCGCC TCTTTGACGT GCAGACCTCG
TCCACCGACG ACGACCTGCT CGATCTGTTC GCCTTCCACG TGGCCAAGGA GCAGGTCCGC
ATCACGGCGG CCGGAGCCCC TGCCGAGGCA GCACCCGCAG CGGTGGCGGC GCAAGCCCCG
GCCGCTGAAG AGCATGCGCA CGACCCCGAT GCCGCCCTGG CCTCGGCCGC CATCCCGCCT
GCCGATGAGG CCTATGGCTT CTTCAACGGC GCACCCGGCA TGCCCCAGGC CGATGGCGCG
CAGGCCATCC AGCCGGCCGG CGCCGTGGCC AAGCCCGCCG CCAAGACGGC GGCCCAGACG
CAGCAGGCGC AGATGGAGTC CACCAGCATC CGCGTGTCGG TGGCCAAGGT CGACCAGCTC
ATCAACCTGG TGGGCGAGCT GGTCATCACC CAGGCCATGC TTGCGCAAAA CAGCCATGGA
CTGGACGCAT CGGCCTACCA GCAACTGCTG GCAGGCCTGG CCGACCTGGA TCGCAATACG
CGCGATCTGC AGGAATCGGT GATGTCCATC CGCATGATTC CCATGTCCAC CGTGTTCAGC
CGTTTCCCGC GCATGCTGCG CGACCTGGCC GGCAAGCTGG GCAAGAAGAT CGACCTGATC
ACGCTGGGCG AGGCCACGGA GCTGGACAAG GGACTGGTCG AAAAGATCAC CGACCCGCTG
ACCCATCTGG TGCGCAACAG CGTGGACCAC GGCATCGAAA TGCCCGAGGA CCGCCTGGCG
GCCGGCAAGT CCGAGCACGG CACGCTGACG CTGGCAGCCT CCCATCAGGG CGGCTCCATC
GTCATCGAGG TGCGCGACGA CGGGCGCGGC ATGAACCGCG AGCGGATTCT GCAGAAGGCC
CGCGAGCGCG GCATGGATGT CTCGGACAAC ATGCCCGATC AGGAGGTCTG GCAGCTGATC
TTCGCGCCGG GCTTCTCCAC GGCCGACGTG GTCACCGACG TGTCCGGGCG CGGCGTGGGC
ATGGACGTTG TCAAGCGCAA TATCGCGGCG CTGGGCGGCT CGGTCGAGAT CGAGTCCACC
CAGGGCAAGG GCATGCGCGT GGCCGTTCGC CTGCCGCTGA CCCTGGCCAT CATGGATGGC
ATGTCGGTCG GCGTCAGCGA CGAGGTCTAC ATCCTGCCGC TGTCCTCGGT GGTCGAGTCC
TTCCTGGTCA AGGCCGAAGA CGTCAACACC GTGGCCAACG GCACGCAGCT GGTCAAGGTG
CGTGACGAGT ACATGCCCGT GTTCGCGCTG GAAAAGACCT TCCGCGTGCC GCGCAGCGAC
ACCAGCCAGT CCAGCAACAT CATGGTGGTG GTCGAGTCCG ACGGCAGCCG CGTGGCCTTG
CTGGTCGACG AGCTGCTGGG CCAGCACCAG GTGGTGGTCA AGAACCTGGA ATCGAACTAC
CGCAAGGTGC CCAACGTTTC GGGCGCCACC ATCCTGGGCG ATGGCACGGT GGCGCTGATC
CTGGACACCG GCGCGCTGGT GCGTCGTGCA CGCCACTGA
|
|---|
| Protein sequence | MADLHQDGAG AGADFDLSQF YQIFFEEAAE NLDQMEQMLL NLDLSAANDE ELNGIFRCAH
SIKGGAATFG FADVTELTHR MESLLDRLRR HEITPIPEMV DVLLESADAS RSLLARHQAG
NEGEALSTTD LVARIETLAE GRSAVPAAAV PAPAPTPAPA PVAAPVQAPA PVAAAPVSGG
AVGTAPSSGG RSLHILIGPL ERLEMAEAIK ELFRDIPGLG RIEDLACDQP QSRLFDVQTS
STDDDLLDLF AFHVAKEQVR ITAAGAPAEA APAAVAAQAP AAEEHAHDPD AALASAAIPP
ADEAYGFFNG APGMPQADGA QAIQPAGAVA KPAAKTAAQT QQAQMESTSI RVSVAKVDQL
INLVGELVIT QAMLAQNSHG LDASAYQQLL AGLADLDRNT RDLQESVMSI RMIPMSTVFS
RFPRMLRDLA GKLGKKIDLI TLGEATELDK GLVEKITDPL THLVRNSVDH GIEMPEDRLA
AGKSEHGTLT LAASHQGGSI VIEVRDDGRG MNRERILQKA RERGMDVSDN MPDQEVWQLI
FAPGFSTADV VTDVSGRGVG MDVVKRNIAA LGGSVEIEST QGKGMRVAVR LPLTLAIMDG
MSVGVSDEVY ILPLSSVVES FLVKAEDVNT VANGTQLVKV RDEYMPVFAL EKTFRVPRSD
TSQSSNIMVV VESDGSRVAL LVDELLGQHQ VVVKNLESNY RKVPNVSGAT ILGDGTVALI
LDTGALVRRA RH
|
|---|
| |