| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0652 |
|---|
| Symbol | |
|---|
| ID | 5746195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 713464 |
|---|
| End bp | 714612 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641295721 |
|---|
| Product | response regulator receiver sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001561683 |
|---|
| Protein GI | 160896101 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.625385 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCAAA ATGTATCTCA TGATAGCGCC CCCGGGGATG CCAGACCACC GCACAAGCCC
TTGCGCATAT TGCACATCGA GGATTCGGCG GCCGACCAGG CGCTGGCGCG GCTGAGCCTG
CTGCGCGGCG GACTGGTCTG CGAGATTGTC GCGGTCGACC TGCTCGATGA TGCCGCAGCC
GCGCTGCAGA GCCAGGCATT CGACCTCATC CTGGCCGACT ACCACCTGCC CGGCTTCACG
GCGCTGGACG CCTGGGAGCT GGTGCGCCGC CAGCCCGGGC ATCCGCCCTT TGTGCTGCTG
TCGGGCGCCA TCGGCGAGTC GGCCGCCGTG GACGTGATGC GCGAGGGCAT CAGCGACTAC
CTGCTCAAGG ACCACATCAC GCGCCTGCCC CATGTGGTCT CGCATGCGCT GGAAGTGCAC
GAGGCCCGCC TGGCACGCCG CCGCGCGGCG GCCGAGCTGG CGGCGTCCGA GCGGCGCCTG
GCCGATCTGA CCGAGCATCT GCAGACCTCC ACCGAGCGCG AGCGCGCCAG CATTGCCCGC
GAGATCCACG ATGACATCGG CGGCTCGCTG ACCTCGGTGA AGTTCGATGT GGCCTGGATT
GCGCGCAATG CGCCCGAGGG CGGACTGCGC GAGCATGCGC TGGCCGCGCT GGAAATGCTG
GAGCATGCGC TGGGTGCAAG CCAGCGCATC ATGATGAACC TGCGCCCGCC CGTGCTGGAC
CAGGGACTGG TGGCCGCCGT GCAATGGCTG GCCGAGAATT TCGAGCGCCG CACGGGCGTG
CCCACCCGGG TGCGCAGCAG CCGCGAGAGC ATGGACATCG CGCCCGACAT CCAGGTCGTG
GCCTACCGCA CGGCCCAGGA GGCGCTGACC AACGTCGGCA AATATGCCCA GGCGCGCCAT
GTGGACATCG ATCTCTCGGA CCGCGAAGGC TTTCTCACGC TGGAGGTGAC GGACGACGGC
GTGGGCCTGG CCGAAGGCGC GCGCGACAAG CCCGAATCCT TCGGTTTGCG CGGTCTGGGC
GAGCGTGCGC GCACCGTTCG GGGCTGGCTG GATGTCAGCA GTCAAGCCGG GCGAGGAACC
TCGGTCATCG TCTCCATTCC GCTGGACGAT GGCGGCACTT GCCCTAATAT CCCGGGCAAT
GAATGCTGA
|
|---|
| Protein sequence | MFQNVSHDSA PGDARPPHKP LRILHIEDSA ADQALARLSL LRGGLVCEIV AVDLLDDAAA
ALQSQAFDLI LADYHLPGFT ALDAWELVRR QPGHPPFVLL SGAIGESAAV DVMREGISDY
LLKDHITRLP HVVSHALEVH EARLARRRAA AELAASERRL ADLTEHLQTS TERERASIAR
EIHDDIGGSL TSVKFDVAWI ARNAPEGGLR EHALAALEML EHALGASQRI MMNLRPPVLD
QGLVAAVQWL AENFERRTGV PTRVRSSRES MDIAPDIQVV AYRTAQEALT NVGKYAQARH
VDIDLSDREG FLTLEVTDDG VGLAEGARDK PESFGLRGLG ERARTVRGWL DVSSQAGRGT
SVIVSIPLDD GGTCPNIPGN EC
|
|---|
| |