| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0638 |
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| Symbol | |
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| ID | 5746181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 701148 |
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| End bp | 702848 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641295707 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_001561669 |
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| Protein GI | 160896087 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCTG TCGCTGAAAT CCCTGTCCCT CAAGCCACTC CCGTGCCCCA GCCTGCCTTG
CAGCAGCGCT GGACGGCCAT GGACCGTGGC GCGCGCCTGC GTTGGGGCGC GATCGCCGTG
CTGCTGGTTG TCGCCCTGGG TGCGGCGGCC ATGTTCTACC GCCAGCCGGA CTACAAGGTG
CTGTTCTCCA ACCTGAGCGA CAAGGATGGC GGCGCCATCG TCGCCCAGCT GTCGCAGATG
AACGTGCCTT ACCGCTACAC GGAAGGCGGC GGTGCCATCC TCATCCCGTC CGACCGCGTG
CACGATGTGC GCCTGAAGCT GGCCACCCAG GGCCTGCCCA AGGGTTCGGT GACGGGTTTC
GAGCTGATGG AGAACAGCAA GTTCGGCATC ACCCAGTTCC AGGAACGCCT CAATTTCCAG
CGCGGTCTTG AAGGCGAACT GACGCGTTCC ATCCAGGCCC TGGCCGCCGT GCAAAGCGCA
CGCGTGCACC TGGCCCTGCC CAATCAGAAC GGCTTTTTCC GCGAGCAGCA AAAGCCCTCG
GCCTCGGTGC TGCTGAGCCT GTACCCGGGC CGTGTGCTGG ACCGCACGCA GATCGCGGGC
ATCGTGCACC TGGTGGCCTC CAGCGTGCCC GAGATGGCTC CCACGGCCGT GAGCATCCTG
GACGACTCGG GCAAGCTGCT GTCGCAGTCG CCCGACGGCA ACGCCAACGC CGTGGACATG
CAGCAGCTGA ACTACACCCA GCAGATCGAG CAGCAGTACG TGCGCCGCAT CCTGGAGATC
CTGGAGCCCG TGGTCGGCAA GAACAATGTG AAGGCGCAGG TCTCGGCCGA GATGGATTTC
AGCCAGACCG AATCGACTTC GGAGCAGCAC CGCCCCAACC AGTCCTCCGA CGCGGGCGTG
GTGCGCAGCC AGCAGGTAGT GGAGAGCACG GGCGAGCAAA AGCCGCCCCA GCCCACGGGC
ATTCCCGGCG CCACCAGCAA CCAGCCGCCC CAGAACGCTT CTGCGCCCGT CAACGGCGCC
AATCCCGCGC CCCAGGCGGC CGACGGCCAG AACGCCGCCC GCTCTGCCAG CAAGCGCGAG
TCCATCACCA ATTACGAAGT GGACAAGACC GTGCGCCATA CACGCGGCAG CACGGGCAGC
ATCAAGCGCC TGACGGCCGC CGTGGTCATC AATGCGCCCC TGGTGGCTGC CCCTGCGCCG
GCCGCTGCCG GTGCGGCAAC CGATGCAGCC ACCGTCGCTG CCGCCGCACG CGGCCTGACG
GCAGCGCAGC AGGCGCAACT GCTGACCCTG GTGCGCGAGA CCGTGGGCTA CAGCGCAGAG
CGCGGCGACT CGGTCAACCT GGTCAGCACG CCCTTTGTGC AGGACGAAGT GCCCGCCGAT
GTGCCGCTGT GGCGCCAGCC CGAAGTGCTG GACATGGCCC GCAGCCTGGG CGTGCCCATC
GGCCTGGCCC TGTTCGGCGC CATCTTGCTG CTGGGCCTGG TGCGACCCAT GCTCAAGGGC
CGCAAGACGG TGGCCGTGGG CGGACAGCTC AATGCCATCG AAGGCGAGCA GCTGGACCGT
CCGGCGCTGG CTGCACCCGC TGTCGATCTT TCGCCCACGC AGGAGCAAGT GCGCCTGGAG
CAGGCGCGCC AACTGGCCAA GCAGAACCCG ATCGCGGTGG CCAACATCGT CAAGACCTGG
ATCAACGGCG AGGCCACCTG A
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| Protein sequence | MSAVAEIPVP QATPVPQPAL QQRWTAMDRG ARLRWGAIAV LLVVALGAAA MFYRQPDYKV
LFSNLSDKDG GAIVAQLSQM NVPYRYTEGG GAILIPSDRV HDVRLKLATQ GLPKGSVTGF
ELMENSKFGI TQFQERLNFQ RGLEGELTRS IQALAAVQSA RVHLALPNQN GFFREQQKPS
ASVLLSLYPG RVLDRTQIAG IVHLVASSVP EMAPTAVSIL DDSGKLLSQS PDGNANAVDM
QQLNYTQQIE QQYVRRILEI LEPVVGKNNV KAQVSAEMDF SQTESTSEQH RPNQSSDAGV
VRSQQVVEST GEQKPPQPTG IPGATSNQPP QNASAPVNGA NPAPQAADGQ NAARSASKRE
SITNYEVDKT VRHTRGSTGS IKRLTAAVVI NAPLVAAPAP AAAGAATDAA TVAAAARGLT
AAQQAQLLTL VRETVGYSAE RGDSVNLVST PFVQDEVPAD VPLWRQPEVL DMARSLGVPI
GLALFGAILL LGLVRPMLKG RKTVAVGGQL NAIEGEQLDR PALAAPAVDL SPTQEQVRLE
QARQLAKQNP IAVANIVKTW INGEAT
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