Gene Daci_0637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0637 
Symbol 
ID5746180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp700653 
End bp700982 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content62% 
IMG OID641295706 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_001561668 
Protein GI160896086 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATGTG TCATGGACCT TCGCATCCCC AGTACCACCT CTCCCCTGTA CGGCACCCAG 
CTCCCCAAAG GCGTGGGCGC AGGCGACGCA TCGACCAAAG TGGCGGCTGG CGGCTTCAGC
CAGGCCCTTC AAGGCGCGCT GCAGTCCGTC AGTTCAGCCC AGAACAACTC CAGCCAGCTG
CAGCGTGAGG TGCAGTTGGA GAACCCGGCC GTCAGCCTCG AAGAAACCAT GATCGCCATG
CAAAAGGCGC AGATCGGCTT CCAGGCCACG ATGCAGGTGC GCAACCGGCT CGTGCAGGCT
TATACCGACG TGATGAACAT GCAGGTGTGA
 
Protein sequence
MECVMDLRIP STTSPLYGTQ LPKGVGAGDA STKVAAGGFS QALQGALQSV SSAQNNSSQL 
QREVQLENPA VSLEETMIAM QKAQIGFQAT MQVRNRLVQA YTDVMNMQV