| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0634 |
|---|
| Symbol | |
|---|
| ID | 5746177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 698597 |
|---|
| End bp | 699361 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641295703 |
|---|
| Product | SAF domain-containing protein |
|---|
| Protein accession | YP_001561665 |
|---|
| Protein GI | 160896083 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1261] Flagellar basal body P-ring biosynthesis protein |
|---|
| TIGRFAM ID | [TIGR03170] flagella basal body P-ring formation protein FlgA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAACT TCAGCACCGC CCATTCGCTA TCCGCCGTCC GAGCCCTCGC TCGCGCCGCC
GCATGCGCTG CGCTTGCCGC TGGAGCGTCG CTGGCAGGTC CTGCCTTCGC GCAAAACGCT
CCTGACGGTG CAGCCCAGCT CAGCCAGATC GGCCAGCGCT TTGCCGACGA GGCCCTGCAG
CAAGGCATGG CCGGCGCAGG CGCCTTGCCC CTGCGCATGG AAGTGCAGAT GGGCCAGCTC
GATCCCCGCC TGCGCCTGGC CGCCTGTGCC AAGGTCGAAC CCTATTTGCC CGCAGGCTCG
CGCCTGTGGG GCCGTACCCG CCTGGGTCTG CGCTGCCTGC AGGGCGCCGT GGCCTGGAAT
GTGTTCCTGC CCATCACGGT CAAGGCCTGG GGGCCGGCCT GGGTGCTGCA AAACGGCGTG
CCTTCGGGCC GCCCGCTGTC GGCCGACGAT GCCGTCCAGG CCGAAGTGGA CTGGGCCGAG
GAATCGGCCG CCGTCTACGC CAACCAGCAG GACTGGGTGG GCCTGGTGGC CTCCCGCCCG
CTGGCCGCAG GCCAGGCGCT GCGCCAGAAC ATGCTGCGCA CGCCGGCGCT GTTCGCGGTG
GGTGCCGAAG TGCGAGTTCT GGTCAACGGT GGTGGTTTTT CCGTCACATC GTCGGGCAAG
GCCATGTCGG CCGCCGGCGA AGGCCAGACC GTGCGGGTTC GCATGGATAA TGGCCGGCTC
ATCTCCGGGG TGGTGAATCC CGAGGGCGTG GTGCTGGTCC AGTAA
|
|---|
| Protein sequence | MPNFSTAHSL SAVRALARAA ACAALAAGAS LAGPAFAQNA PDGAAQLSQI GQRFADEALQ
QGMAGAGALP LRMEVQMGQL DPRLRLAACA KVEPYLPAGS RLWGRTRLGL RCLQGAVAWN
VFLPITVKAW GPAWVLQNGV PSGRPLSADD AVQAEVDWAE ESAAVYANQQ DWVGLVASRP
LAAGQALRQN MLRTPALFAV GAEVRVLVNG GGFSVTSSGK AMSAAGEGQT VRVRMDNGRL
ISGVVNPEGV VLVQ
|
|---|
| |