Gene Daci_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0627 
Symbol 
ID5746170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp693021 
End bp693728 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content66% 
IMG OID641295696 
Productflagellar L-ring protein 
Protein accessionYP_001561658 
Protein GI160896076 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAAC GAACCTTCTC CCTTTCCGCG ACGGGCACGT GCCTGGCGCT GGCGGCAGTC 
CTGTCGGGCT GCACGACGCT CAATGACCCG CCGCCGGTGG ACATGCCGTC CACGGCGCCG
CCGGTGCTGC CGCAGCCCGC CCCGGTGGCG GGCAGCCCCA CGGGCAGCCT GTTCAACGCG
GCCAGCTACC GGCCCGGTTT CGAGAACCGG CGTGCGCGCC TGGTGGGGGA CCTGGTGACG
GTGCAGATCG TGGAGCGTGT GACGGCCAGC CAGAAGTCGG ATTCGGGCCT CAAGCGGTCC
AACAAGACCA CGGCCGGGAT TTCGGCGCTG CCGCTGTTTT CGGGCAATGC GCTGGCCAAT
CTCAAGGACC GCTCGAACAT CGGTTTCAAC AACAACAACG ACTACACGGG CTCGGGCTCG
ACGTCGAGCG ACAACACGTT CACGGGCGCC ATCAGCACGA CAGTGGTCGA TGTGCTGCCC
AACGGCCATC TGGTGATCGC CGGAGAAAAG CAGATCGGCG TGAACCACAA CGTGGATGTG
CTGCGTTTCA CGGGCACGGT GGACCCGCGC ACGATGCAGC CCGGCAGCCT GGTCGCATCG
ACCCAGGTGG CCAATGTGCG CGTGGAATCG CGCAGCCGCG GACAGGCCGG GGAAGCGCAG
TCAATTGGCT GGTTGTCCCG GTTCTTTTTG AACGTTATGC CGTTCTGA
 
Protein sequence
MTQRTFSLSA TGTCLALAAV LSGCTTLNDP PPVDMPSTAP PVLPQPAPVA GSPTGSLFNA 
ASYRPGFENR RARLVGDLVT VQIVERVTAS QKSDSGLKRS NKTTAGISAL PLFSGNALAN
LKDRSNIGFN NNNDYTGSGS TSSDNTFTGA ISTTVVDVLP NGHLVIAGEK QIGVNHNVDV
LRFTGTVDPR TMQPGSLVAS TQVANVRVES RSRGQAGEAQ SIGWLSRFFL NVMPF