| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0616 |
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| Symbol | |
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| ID | 5746159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 678625 |
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| End bp | 681549 |
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| Gene Length | 2925 bp |
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| Protein Length | 974 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641295685 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001561647 |
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| Protein GI | 160896065 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTTTG CGCCCGCTTA TCCAGGGGCC GTGTTTGCCG GCTTGCCTGC ACGATGGCGG
TATTTGTGCG GGTGTCGGCT TGGGGCCGGG CCTGTGGTGG GGCGCTTGCC CGCAACCTTG
ATGACCAAGA TGAATACGAA CGAGCATTTG CAGCAGGCCC GCCAGTTGCA TGACCAGTGG
CAGTTCGAGC AGGCTCGCCA AGCCTATGAA AAGGTGCTGG AGCAGGAGCC TGCCCATGCC
GAAGCCCTGC ACGGCATGGC CCAGTTGCTG GGTCTGCACC AGCTGCGCAG CGCAGAGGCG
CTGCCCTATC TGGAGGCGGC CATCGGCGTG CGGCCTGCGG ATTTTGGCTA CTGGCGCCTG
TACATCCACA TGCTGATCCG TGAGGGGCTG TTGGACATGG CCATCTCGCT GATCGACGTG
GCACGGGCCA ACGGCATGCA GGAGATTGCG CTGGAGCAGC TGGAAAAGGA TGTGGCTCTG
GTGCAGGGCG CCCAGGCCGC AGCGCTTCTG GAGGAGCAGG CCGCGCGTTG GCCGCTGGGG
CCTGCTGAGC CGGAGATGGC GCCTGCTGCC GGCGATGGCC GGGGCCGGGT GCCCGAGGCG
CAGCTGCGGC TGCTGATGCA GCTGTTCGCC CAGCGCGAGC ATGCCGAGGT CAGTCAGCTG
GCGGGGTCGC TGGTTCGCCA GTATCCCAGG AGCGGCTTGG TCTGGAAGCT CAAGGCGGCA
GCCGATCATG CGAACGGCCG CATCGAGGCG GCCCTGCAGG CAGCGCGCCA GGCAGCCGTT
CTGCTGCCGC GCGATGCCGA GGTGCAGTTC AACCTGGGTG GTATCTGCCT GCAGGCAGGC
CACGCGGCCG AGGCCGAGCG TGCGATGCGC GCGGCTTTGG CGCTGCGGCC GCATTGGACC
CGGGCTTTCT CGCATCTGGG CGATGCGCTT TGTGCCCAGG ACCGTACCGA TGACAGCCTG
CCTTGCTACG TGAGCGCGCT GCTGCTCGAT CCCGAGGATG TGGACACGCT GTCGCGGCTG
ACCGCTGCGC TGCAGAAGAC CGGACGGCTG CAGGAGTGCG CACAGTTCCT GGTGCTGCTC
ATGCAGCAGC GGCCAGAGGA TCTGCGACTG TGCCTGGCCA GCGCCCATGT GCTGGGCGAG
GCTGGCTGGG TCTTGCAGGC TGAAACCGCG TATCGGATGG CGCTGCAGAT CGAGCCTGAA
AGTCTGGAGC TGCTGCTGCA TCTCGCAATG CTGCTGTGCT CCGGGGGGCG GCTGGGAGAG
GCCGAAACCT GCTTGCGCAA GGCGCTGCAA TTGCGCCCCG ACAATGCCGT GCTCCACTGC
GAGACGGCCT TCGCGCTGTT TGCCCAGAAA AAATGGGAGC AGGCGCTGGA ACTGCTCGAA
GAGGCGCTGC GCATCGAGCC CGACAATGCC CGCGCGCACA TGCTTCGTTG CCAGGTCCTG
CTGGAGACAG GTGATCTGCC CCGGCTCGAC CGGGCCTTGA ATGAAGCGCT GGAGCGCTTG
CCCGGTGACC GGGAACTGAT GTTCCAGCGT GCCGCCTACT GGGACCGCTG CGGCGATGCC
CAGCGCCACA TGCAACAGCT GGATGAACTG GTGAAGCTGC ACCCGGACTA CGAGCCCGCC
TACAGCGCTC GCCTGTTCGC CATGATCCAT TCGCCTGAGG CCAGTGCAGC CTCGGTGGGC
CGGGCCAACC GCGAATATGG CGCGCTCATG CGGCGCCACT CCGCGGGGAA GCAAGGGACC
GGGCATGACA ATGCCCGCGA CCCCGGCAAG ACATTGCGCC TGGGCTTTGT GTCCGGCGAT
CTTCGCGCCC ATGCGGCCGC CAAGTTCTTC CTGCCGGTGA TGCGCGAGCT GTCCCGGCAC
AGCGATCTGG TGTGCGTTGC CTATTGCAAC AACGAGATCC ACGACGAAGT CACCAAGGAG
TTCCAGGGCC TGTTCCAGCT GTGGCGCGGT ATCCGGGATA TGAATGCGCA GTCGCTGTCG
AACCTGGTGC GGGCTGACGG CATCGATATC CTGATCGATC TGAGCGGCCA TACGCGCGGG
CACCGGCTGG ATCTGTTTGC CGCCAAGCCC GCACCGCTGC AGATGACCTG GATAGGCAAC
CCCGGCAGCA CGGGCCTGGA GAGCATGGAC TACATCGTGC TCAGCGACCT GATCCTGGAA
GATGAACTGC TCAAGACCCA GCTGACGGAG CGGCTGATGC GAGTTCCGCT GGCCTACGTC
TTCGACGGAG GCATCCACCA GGAGGCCGTG GCGCCACTGC CGGCGCTGCG CAACGGGCAT
TTGACGTTTG GCTCCTTCAA CCGTTTGTCC AAGATCAACC GCAAGGTGGT TTCTGTCTGG
GGTGAGGTGC TGCGCACGCT GCCCACGGCG CGGCTGAAGA TCGCGGCCTG CCCCCGTTCC
GGTCCTCCGC AGCACCTGCG CGAATGGCTG GCCGAGGAGG GCGTGGCCGC GCAGCGCGTC
GATTTTGTGG AGCAGATGGG ATTCGAGCAC TATCTGCGGG CCCACCATGA CATAGACATC
TGCCTGGATA CCTTGCCTTT TACGGGCGGA GTGGTCACCA ACCACGCCCT GTGGATGGGC
GTGCCCACGC TGACGCTGAT GGGGGAACTG CTGGCGGGGC GGCAGTCGGC CGAAGTGATG
GCTCGTGTGG GCCTGGACCA GGGCTTTGCA GCACGGGACC TGGCGCAGCT GCTGGACCAG
GCTGCGTTCT GGCAGGCACA TTTGCCGCAG CTGCAGCAGA TACGCCAGGG GCTGCGCGAA
CGCCTGCAGG ACCAGGAGCC GCAACAGGCG GACATCGTGG CGCGCTCGGT GGCGATGGGA
ATGCGCCAGG CCTGGGCCCG CTGGTGCCAG GGACAGGAGC CTGTGGATCT GCGTGTCTCC
TATGAGGATC TGGGTCTGGC CGCTCCCGTG GCGCCCGTTT TGTAA
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| Protein sequence | MRFAPAYPGA VFAGLPARWR YLCGCRLGAG PVVGRLPATL MTKMNTNEHL QQARQLHDQW
QFEQARQAYE KVLEQEPAHA EALHGMAQLL GLHQLRSAEA LPYLEAAIGV RPADFGYWRL
YIHMLIREGL LDMAISLIDV ARANGMQEIA LEQLEKDVAL VQGAQAAALL EEQAARWPLG
PAEPEMAPAA GDGRGRVPEA QLRLLMQLFA QREHAEVSQL AGSLVRQYPR SGLVWKLKAA
ADHANGRIEA ALQAARQAAV LLPRDAEVQF NLGGICLQAG HAAEAERAMR AALALRPHWT
RAFSHLGDAL CAQDRTDDSL PCYVSALLLD PEDVDTLSRL TAALQKTGRL QECAQFLVLL
MQQRPEDLRL CLASAHVLGE AGWVLQAETA YRMALQIEPE SLELLLHLAM LLCSGGRLGE
AETCLRKALQ LRPDNAVLHC ETAFALFAQK KWEQALELLE EALRIEPDNA RAHMLRCQVL
LETGDLPRLD RALNEALERL PGDRELMFQR AAYWDRCGDA QRHMQQLDEL VKLHPDYEPA
YSARLFAMIH SPEASAASVG RANREYGALM RRHSAGKQGT GHDNARDPGK TLRLGFVSGD
LRAHAAAKFF LPVMRELSRH SDLVCVAYCN NEIHDEVTKE FQGLFQLWRG IRDMNAQSLS
NLVRADGIDI LIDLSGHTRG HRLDLFAAKP APLQMTWIGN PGSTGLESMD YIVLSDLILE
DELLKTQLTE RLMRVPLAYV FDGGIHQEAV APLPALRNGH LTFGSFNRLS KINRKVVSVW
GEVLRTLPTA RLKIAACPRS GPPQHLREWL AEEGVAAQRV DFVEQMGFEH YLRAHHDIDI
CLDTLPFTGG VVTNHALWMG VPTLTLMGEL LAGRQSAEVM ARVGLDQGFA ARDLAQLLDQ
AAFWQAHLPQ LQQIRQGLRE RLQDQEPQQA DIVARSVAMG MRQAWARWCQ GQEPVDLRVS
YEDLGLAAPV APVL
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