| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0613 |
|---|
| Symbol | |
|---|
| ID | 5746156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 676363 |
|---|
| End bp | 677124 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641295682 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001561644 |
|---|
| Protein GI | 160896062 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCC CCGATCCCTT CTCGCTGGCG GGCAAGCGAA TTCTCGTCAC CGGCGCTTCT
TCCGGCATAG GCAGGCAGAT TGCCATTTCC TGCGCCGAGC AAGGCGCTGA ACTGGTCATC
ACCGGCCGGA ACCCTGACCG GTTGGCCTCC ACCTACGAGG CACTGCGGGG CGATGGACAT
CAATCCATCG TTGCCGACCT TTCCAATGCG GCAGATTTGG ACAGTCTTGT CACGGCGGCA
GGCGTGCTCC ATGGCGTAGT GCACGCGGCA GGAATTTCCA AGCTCGTGCC GTTTCGCATG
GTCAATGAGA CGCACCTGGA CGAAATTTTT GCCAGCAATA CTTTCGCACC GATTCTGCTG
ACCAAAGGGT TGCTAGCCAA AAAGCGCATT TCCCCTCAGG GCTCCATCGT CTTCGTTACA
TCGGTCGCGT CGCACATCGG CCCCATGGCC AGCGCTGCCT ACGCGGCAAG CAAGGCCGCA
TTGCTGGGAG CCGTCCGCAC TCTGGGTCAG GAAGTGGCCA AGCAAGGTAT ACGAGCCAAC
TGCATTGCAC CCGGCTATGT CCGCACGCCC TTGCTCGATG GCTTGAGTCA GGGCGGCGCC
AACATGGGCA GCCTGCTTGA GCTGGCACCT CTCGGACTGG GCGAGCCAGA AGATGTCGCC
TATGCGGCGG TGTTCTACCT CTCGGACGCA AGCCGCTGGT TGACGCGCAA CTATTTCATC
GTTGACGGTG GTCTGACCAT TCCCATGGAC ATTTACGCAT GA
|
|---|
| Protein sequence | MSTPDPFSLA GKRILVTGAS SGIGRQIAIS CAEQGAELVI TGRNPDRLAS TYEALRGDGH
QSIVADLSNA ADLDSLVTAA GVLHGVVHAA GISKLVPFRM VNETHLDEIF ASNTFAPILL
TKGLLAKKRI SPQGSIVFVT SVASHIGPMA SAAYAASKAA LLGAVRTLGQ EVAKQGIRAN
CIAPGYVRTP LLDGLSQGGA NMGSLLELAP LGLGEPEDVA YAAVFYLSDA SRWLTRNYFI
VDGGLTIPMD IYA
|
|---|
| |