| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0596 |
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| Symbol | |
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| ID | 5746139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 658460 |
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| End bp | 659173 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641295665 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
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| Protein accession | YP_001561627 |
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| Protein GI | 160896045 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACACCG CCAAAGGCCA ACTCGACCGC GATGCACTGA TCCGTCGGCA TGTACCTCTG
GTACGCCGGA TCGCGCTGCA CATGATCGCC AAGCTGCCTC CCAATGTGGA GCTTGATGAT
CTGATACAGG TCGGAATGAT CGGCCTGGCC GAAGCCCTGT CCCGCTTCGA GAGCGAGCAG
GGCGTGCAAT TCGAGACCTT CGCCAGCCAG CGCATCCGTG GCGCCATGCT CGATGAGCTG
CGCGAAGGCG ACTGGATGAG CCGCAGCTCC CGCAAGAGCC AAAAGGACAT CGAGCACGCG
CTGCACCGCC TGGAGCAGCG CCTGGGGCGC ACGCCGCTGG AATCCGAGAT CGCCGACGAA
CTGGGCATGG ACCTGGACGA CTACCAGTCG CTGCTGGGCA AGGTGCGCGG CACGCAGCTG
GTGTATCTGG AGGACATGTC GGGTGGCGAC GAAGGCGAGG ACTTCCTCGA GCGCCACGTG
GCCGACAGCG GCGCCGATCC CTTTGCGCTG CTGCGCGACC ACCGCCTGCG CGTGGCCCTG
GTCGAAGCCA TCAAGGCCCT GCCCGAGCGC GAGCAGTACA TCATGGGCAT GTACTACGAG
CACGACATGA ACCTCAAGGA AATCGCCGCC GTGCTCGGCG TGACCGAATC GCGCGTGTGC
CAGCTGCACA GCCAGGCGAT TGCGCGCTTG CGGACAAAAA TGCGGGCGCA TTGA
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| Protein sequence | MYTAKGQLDR DALIRRHVPL VRRIALHMIA KLPPNVELDD LIQVGMIGLA EALSRFESEQ
GVQFETFASQ RIRGAMLDEL REGDWMSRSS RKSQKDIEHA LHRLEQRLGR TPLESEIADE
LGMDLDDYQS LLGKVRGTQL VYLEDMSGGD EGEDFLERHV ADSGADPFAL LRDHRLRVAL
VEAIKALPER EQYIMGMYYE HDMNLKEIAA VLGVTESRVC QLHSQAIARL RTKMRAH
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