Gene Daci_0581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0581 
Symbol 
ID5746124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp639914 
End bp640807 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content70% 
IMG OID641295650 
ProductIclR family transcriptional regulator 
Protein accessionYP_001561612 
Protein GI160896030 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACAATT CATTTGACAT AGTGAAAAAC CCTCGGAGCC GCAAACTTCG GGTTCCAGCC 
TTCACAATGC CTGCCATGTC CGATGCCGCC TCCTCCCCGA ACGACCCCGT CTTCCCCTCC
GACAGCGCCG ATGACGAGCC TGCGCGCGGC CCGCGCGGCA TCCAGAGCGT GGAGGTCGGC
GGCCAGCTGC TCAAGGCGCT GGCGCGCACC GGCCGTCGCA TGGCGCTGAA GGATCTGGCG
CGCGAGGCCG GCATGACGGC GGCCAAGGCC CACCCCTACC TGGTGAGCTT CTGCAAGCTG
GGCCTGATGG AGCAGGACCG CGCCAGCGGC CACTACGGCC TGGGGCCGCT GGCCATACAG
ATGGGGCTGA TCAGCCTGCA GCAGGCCGAT CCCGTGCGCC TGGCGATTGC CGAGCTGCCC
GCGCTGGCGC AGGAGGTGGG CAGTACGGTG TCGATTGCCA TGTGGAGCGG CCAGGGGCCG
ACCATCATCC GCGTGGAAGA GGGGCCCACC CATGTCTATG TGGCCATGCG CCACGGCACG
CCCGCATCGC TGCGCCACAC GGCCACGGGC AAGATCTTTG CGGCCTTTGG CGAGCCCGGG
CGCATCGCGC CCCTGCTGGA CGCGGAAGGT CACAGCCTGG AGGAGCCCGC CTTTGCAAAG
GAGCTGGCCG CCATCCGCGC CAGCCGCCTG AGCCGGGTCG AGAACCAGCT GCTGTCAGGC
GTGAGCGCGC TGGCCGTGCC GGTGTTCGAC GGCTTTGGCC AGCTGGTGCT GGCCATTGCC
GCCATCGGCC CTTCGGCCAC GCTGGACCTG GACCTGCAAG GCCGGCCGGC CCTGCTGCTG
CAGGCCCAGG CGCGCAGCCT GTCCCAGCGC CTGGGAGCGC CGGCCCAGGC CTGA
 
Protein sequence
MNNSFDIVKN PRSRKLRVPA FTMPAMSDAA SSPNDPVFPS DSADDEPARG PRGIQSVEVG 
GQLLKALART GRRMALKDLA REAGMTAAKA HPYLVSFCKL GLMEQDRASG HYGLGPLAIQ
MGLISLQQAD PVRLAIAELP ALAQEVGSTV SIAMWSGQGP TIIRVEEGPT HVYVAMRHGT
PASLRHTATG KIFAAFGEPG RIAPLLDAEG HSLEEPAFAK ELAAIRASRL SRVENQLLSG
VSALAVPVFD GFGQLVLAIA AIGPSATLDL DLQGRPALLL QAQARSLSQR LGAPAQA