Gene Daci_0579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0579 
Symbol 
ID5746122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp637064 
End bp638740 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content71% 
IMG OID641295648 
ProductFAD-dependent oxidoreductase 
Protein accessionYP_001561610 
Protein GI160896028 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCACC CCGCCATCTC CCTGCAAGCG CTGCGCGGCA GCGGCGCAGA CATACAGTCC 
ATCCACATCC CCTACGAGCG CCATGCCGAC CAGGACGCCG GTGCGGACAC GCCCGCCCGG
CATCCCGTGG TCATCGTCGG CGCCGGCCCC GTGGGCCTGT CGCTGGCCAT CGACCTGGCC
CAGCGCGGCC AGCGCGTGGT GCTGCTGGAC AACGACTGCC GGCTGTCCAC GGGCTCGCGC
GCCATCTGTT TTTCCAAGCG CACGCTGGAG ATCTGGGACC GCCTGGGCGT GGGCCAGGCG
ATGGTGGACA AGGGTGTGTC CTGGAACCTG GGCAAGGTCT TCTTCAAGGA CCAGCCGCTG
TACCGCTTCG ACCTGCTGCC CGAGGACGGC CACGAGCGCC CGGCCTTCAT CAACCTGCAG
CAGTACTACG CCGAGGCCTA CCTGGTCGAG CGCGCACTGC AGCTGCCGCT GATCGACCTG
CGCTGGCACA GCAAGGTCAC GGCGCTCGAG CCGCAGGCCG AGGGCGCCCT GCTGACCGTG
GAGACGCCCG ATGGCAGCTA CCGCATCGAT GCGCAATGGG TCCTGGCCTG CGACGGCTCG
CGCTCGCCGC TGCGTGGCCT GCTGGGCCAG GAAAGCCATG GCCGCATCTT CCGCGACCGC
TTCCTGATCG CCGACGTGAA GATGCACGCC GAATTCCCCA CCGAGCGCTG GTTCTGGTTC
GACCCGCCCT TCCACCCGGG CCAGAGCGTG CTGCTGCACC GCCAGCCCGA CGATGTCTGG
CGCATCGACT TCCAGCTGGG CTGGGACGCG GACCCCGAGG AAGAGAAAAA GCCCGAGAAC
ATCGTGCCGC GCATCCGCGC CCTGCTGGGC AAGGACGCGC CCTTCGAGCT GGAATGGGCC
AGCGTCTACA CCTTCGCCTG CCTGCGCATG GACCGCTTCG TCCATGGCCG CGTGGTCTTC
GCGGGCGACA GCGCCCACGG CGTCTCGCCA TTTGGCGCAC GCGGCGCCAA CAGCGGCGTG
CAGGATGCCG AGAACCTGGC CTGGAAGCTG GACCGCGTGC TGCGCGGCCA GGCCGATGCC
TCGCTGATCG CCACCTACGG CGCCGAGCGC GAATACGCGG CCGACGAGAA CATCCGCAAC
TCCACGCGCG CCACCGACTT CATCACGCCC AAGAGCGAGA TCAGCCGCCT GTTCCGCGAC
GCCGTGCTCG ACCTGGCGCG CGACCATGAA TTCGCGCGCC GCATCGTCAA CAGCGGGCGG
CTGTCCGTGC CGGCCACGCT GCATGGCTCC GCGCTCAACA CGCCTGACAC CGACACCTTC
GACGGAACGC AGCTGCCCGG CGCCGTGCTG GCCGATGCGC CCATGCGCCG GCCCGGCGCA
GACGGCACGG CCTGGCTGCT GCGCGCACTG GGACCGGACT TCACGCTGCT GCACTTCGGC
CCCACGCCCG CCTGGGCGCA GGCGCTGCCC GGCGTGCTCA ACCTGTCCAT CGCGGCCGAG
GGAGAGGCCC ATGCGCACGG CGCCGACCTC ATCGATGCAC GCGGCCTGGC GGCCAAACGC
CTGGATGCGC GCCCCGGCAC CAGCTACCTG CTGCGGCCTG ACCAGCATGT CTGCGCGCGC
TGGCGCCGCC CCGACGAGGC CGGCGTGCGC GCCGCTCTCC AAAGAGCCTC CCCCTGA
 
Protein sequence
MSHPAISLQA LRGSGADIQS IHIPYERHAD QDAGADTPAR HPVVIVGAGP VGLSLAIDLA 
QRGQRVVLLD NDCRLSTGSR AICFSKRTLE IWDRLGVGQA MVDKGVSWNL GKVFFKDQPL
YRFDLLPEDG HERPAFINLQ QYYAEAYLVE RALQLPLIDL RWHSKVTALE PQAEGALLTV
ETPDGSYRID AQWVLACDGS RSPLRGLLGQ ESHGRIFRDR FLIADVKMHA EFPTERWFWF
DPPFHPGQSV LLHRQPDDVW RIDFQLGWDA DPEEEKKPEN IVPRIRALLG KDAPFELEWA
SVYTFACLRM DRFVHGRVVF AGDSAHGVSP FGARGANSGV QDAENLAWKL DRVLRGQADA
SLIATYGAER EYAADENIRN STRATDFITP KSEISRLFRD AVLDLARDHE FARRIVNSGR
LSVPATLHGS ALNTPDTDTF DGTQLPGAVL ADAPMRRPGA DGTAWLLRAL GPDFTLLHFG
PTPAWAQALP GVLNLSIAAE GEAHAHGADL IDARGLAAKR LDARPGTSYL LRPDQHVCAR
WRRPDEAGVR AALQRASP