Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0574 |
Symbol | |
ID | 5746117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 629801 |
End bp | 631693 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641295643 |
Product | ABC transporter related |
Protein accession | YP_001561605 |
Protein GI | 160896023 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.305546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCC CCGTTTCCTC GCAGGCCGCG GCGCCTGCCA AGGCCGCTTC GGGCGGCATC AGCACGCGCG TGCTCACGGT GGCGGCCATT GCGCTGCTGG CCGCGTCCTG GGGCTTTCTG CCCGATTTCA CCGTCGTCAT CCTCAGCTAC ATCGGCCTGT TCGCCATGGT GGCCGCAGGC CTGGTGATGC TGACCGGCGT GGGCGGCATG ACCTCGTTCG GCCAGGCGGC CTTCGTGGGC ATCGGCGCCT ATGCCACGGC CTGGGTCTGC ACGGCGCCTG CCTCGGTGGC GGCGCTGGGC GGGCTGGTGG GCGCGGCGGG CCTGCCCTGG GTGGGCCTGG CGCTGGGCCT GCTCATCACC TTCGTCGTGG CCTGGCTGCT GGGCGCGGTC ACGGTCAAGC TGCAGGGCCA CTACCTGCCG CTGTGCACCA TCGCCTGGGG GCTGAGCCTG TACTACCTGT TCGGCAACAT GGAGTTCCTG GGCGGGCAGA CCGGCATCAC GGGCATTGCG CCGCTGGTGA TCGGTGGCGT CTCGCTGGCC TCGCCGCGCG CCATGGGCGT GGTGATCTGG GCCGTGCTGC TGGTGGCGCT GTGGCTGCTG CACAACCTGC TGGACTCGCG CGAGGGCCGG GCCATCCGCG CGCTGCGCGG CGGCCGCGTC ATGGCCGAGT CCATGGGCAT CGACACGGCG CACTACCGCG TCAAGCTCTT CGTGCTGGCG GCCCTGCTGG CCACGCTGTC GGGCTGGCTC TACGCCCACA TGCAGCGCTT CGTGAGCCCG GCGCCCTTCA ACCTGAACGT GGGCATCGAG TACCTGTTCA TGGCCGTGGT CGGCGGCGCC GGCCACCTGT GGGGCGCCGT GCTGGGTGCC ACGCTGATCA CCCTGGTCAA GCAAAAGCTG CAGGACATAT TGCCGGCCCT GCTGGGCACA AGTGGCAACT TCGAGGTCAT CGTTTTCGGC CTGCTGATGG TGCTGGTGCT GCAGCGCTTT GCAGAAGGCC TGTGGCCCAC GCTGCAGGCG CTTACGGCAC GCTGGGTGCG CCGGCCCGTG TCCGATCTGA AGCTGGCGGA CGCGGCGCCG CTGGCGCAGC GCGCGCTGCC CGCTACGGGC CAGGTGCTGC TGGCGGCCGA GCATGTGACC AAGCGCTTTG GCGGCCTGGT GGCCAACAAC GATGTGGCCA TGACGCTCAA GGCCGGCGAG GTGCATGCGC TGATCGGCCC CAACGGCGCG GGCAAGAGCA CCTTCTTCAA CATGATCTCG GGCGTGGACT CGCCCACCGA GGGCCAGGTC CGCTTCATGG ACCAGGCCAT GAACGATGCG CCCTCGCGCC GCTTCGCCGC CCTGGGCCTG GGCCGCACTT TCCAGCATGT GCGCCTGCTG GGCCAGCGCA GCGTGCTGGA GAACGTGGCG GTGGGCGCGC ACCGGCGCGC GCACCGGGGC TGGCTGGCCT CCATGCTGCG CCTGGACCGG GCCGAGGAGG CCTCGGTGCT GGCCGAGGCG CGCCGCCAGA TCGAGCGCTG CGGCCTGGGC GCCTTCGCCG ACGTGCCGGC CGCCTCGCTG GCCCTGGGCC AGCAGCGCAT CGTGGAGATC GCACGCGCCC TGGCCGGACA GCCTGCTGCC CTGCTGCTGG ACGAGCCGGC CGCCGGCCTG CGCCACCTGG AAAAACAGGC CCTGGCCGAC CTGCTGCGCC AGCTGCGCGC CGAGGGGCTG GGCATTCTCG TCGTCGAGCA CGACATGGAG TTCGTCATGA ATCTTGCGGA CCGCATCACG GTGCTGGAGT TCGGCACCGT GATTGCCGAA GGCACGCCGG CCCAGATCCA GGTCAACCAG CGCGTGCTGG ATGCCTACCT GGGCGGCGGC GACGACGACG AGGCAACCGG AGAGACGGCA TGA
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Protein sequence | MSAPVSSQAA APAKAASGGI STRVLTVAAI ALLAASWGFL PDFTVVILSY IGLFAMVAAG LVMLTGVGGM TSFGQAAFVG IGAYATAWVC TAPASVAALG GLVGAAGLPW VGLALGLLIT FVVAWLLGAV TVKLQGHYLP LCTIAWGLSL YYLFGNMEFL GGQTGITGIA PLVIGGVSLA SPRAMGVVIW AVLLVALWLL HNLLDSREGR AIRALRGGRV MAESMGIDTA HYRVKLFVLA ALLATLSGWL YAHMQRFVSP APFNLNVGIE YLFMAVVGGA GHLWGAVLGA TLITLVKQKL QDILPALLGT SGNFEVIVFG LLMVLVLQRF AEGLWPTLQA LTARWVRRPV SDLKLADAAP LAQRALPATG QVLLAAEHVT KRFGGLVANN DVAMTLKAGE VHALIGPNGA GKSTFFNMIS GVDSPTEGQV RFMDQAMNDA PSRRFAALGL GRTFQHVRLL GQRSVLENVA VGAHRRAHRG WLASMLRLDR AEEASVLAEA RRQIERCGLG AFADVPAASL ALGQQRIVEI ARALAGQPAA LLLDEPAAGL RHLEKQALAD LLRQLRAEGL GILVVEHDME FVMNLADRIT VLEFGTVIAE GTPAQIQVNQ RVLDAYLGGG DDDEATGETA
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