Gene Daci_0573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0573 
Symbol 
ID5746116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp628776 
End bp629804 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content69% 
IMG OID641295642 
Productinner-membrane translocator 
Protein accessionYP_001561604 
Protein GI160896022 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.4403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGC AAATCGCCCT GCTGCTGGGG CAGGACGGCA TCGTCAACGG CGCCGTCTAC 
GGCCTGATGG CGCTGGCCCT GGTGCTGGTG TTCTCGGTCA CCCGCATCAT CTTCATTCCG
CAGGGCGAGT TCGTCGCCTT CGGCGCGCTC ACCCTGGCCA TGATGCAGGC CGGCCGCGTG
CCCACCACGC TGTGGCTGCT GCTGGCCCTG GCCGCCGCCG TGCTGGTGGT GGACCTGCTG
CGCTGGCGCG CGGGCAGCCA GGTGAGCTGG CCCGCCACCT TCCTGTGGTG CCTGGCGCTG
CCGGCCATTG CCGTGGCCCT GGCCTGGGGG CTGCGCCCGT CCTCGCTGAT GCTGCAGGCA
CTGGCCACCC TGGTGCTGAT CACGCCCATG GGGCCGCTGC TGTACCGCCT GGCCTACCGG
CCGCTGGCCC ATGCCTCGGT GCTGATGCTG CTCATCGTCT CGGTGGCCAT GCACGGCGTG
CTGGTCGGCC TGGGGCTGCT GTTCTTCGGG GCCGAAGGCT CGCGCACCCC CGCGTTTTCC
GAGGCGCAGC TGCGCCTGGG CGACATCACG ATCTCGGGCC AGTCCCTGGT GGTGGTGGGC
GTGACCCTGG TGCTGGTGGC CCTGCTGTTC GTGTTCTTCG AGCGCTCCAT GATCGGCAAG
GCGCTGCGCG CCACGGCCAT CAACCGCGTG GGCGCACGCC TCATGGGCAT TCCCACGGCC
ATGGCCGGCG ACGTGAGCTT TGCGCTGGCC GCGCTGATCG GCGCCATCTC CGGCCTGCTG
ATCGCGCCGC TGACCACGGT GTACTACGAC ACCGGCTTTC TGATCGGCCT CAAGGGCTTC
GTGGCCGCCA TCGTGGGCGG GCTGGCCAGC TACCCGCTGG CCCTGGCCGG CGCGCTGCTG
GTCGGGCTGC TGGAGGCCTT CTCGTCGTTC TGGGCCAGTG CCTACAAGGA GGTGCTGGTG
TTCACGCTGA TCATCCCGGT GCTGTGGTGG CGATCGCGCA ATAGCCACCA TGTGGAGGAA
GAAGAATGA
 
Protein sequence
MDLQIALLLG QDGIVNGAVY GLMALALVLV FSVTRIIFIP QGEFVAFGAL TLAMMQAGRV 
PTTLWLLLAL AAAVLVVDLL RWRAGSQVSW PATFLWCLAL PAIAVALAWG LRPSSLMLQA
LATLVLITPM GPLLYRLAYR PLAHASVLML LIVSVAMHGV LVGLGLLFFG AEGSRTPAFS
EAQLRLGDIT ISGQSLVVVG VTLVLVALLF VFFERSMIGK ALRATAINRV GARLMGIPTA
MAGDVSFALA ALIGAISGLL IAPLTTVYYD TGFLIGLKGF VAAIVGGLAS YPLALAGALL
VGLLEAFSSF WASAYKEVLV FTLIIPVLWW RSRNSHHVEE EE