Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0573 |
Symbol | |
ID | 5746116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 628776 |
End bp | 629804 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641295642 |
Product | inner-membrane translocator |
Protein accession | YP_001561604 |
Protein GI | 160896022 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.4403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATCTGC AAATCGCCCT GCTGCTGGGG CAGGACGGCA TCGTCAACGG CGCCGTCTAC GGCCTGATGG CGCTGGCCCT GGTGCTGGTG TTCTCGGTCA CCCGCATCAT CTTCATTCCG CAGGGCGAGT TCGTCGCCTT CGGCGCGCTC ACCCTGGCCA TGATGCAGGC CGGCCGCGTG CCCACCACGC TGTGGCTGCT GCTGGCCCTG GCCGCCGCCG TGCTGGTGGT GGACCTGCTG CGCTGGCGCG CGGGCAGCCA GGTGAGCTGG CCCGCCACCT TCCTGTGGTG CCTGGCGCTG CCGGCCATTG CCGTGGCCCT GGCCTGGGGG CTGCGCCCGT CCTCGCTGAT GCTGCAGGCA CTGGCCACCC TGGTGCTGAT CACGCCCATG GGGCCGCTGC TGTACCGCCT GGCCTACCGG CCGCTGGCCC ATGCCTCGGT GCTGATGCTG CTCATCGTCT CGGTGGCCAT GCACGGCGTG CTGGTCGGCC TGGGGCTGCT GTTCTTCGGG GCCGAAGGCT CGCGCACCCC CGCGTTTTCC GAGGCGCAGC TGCGCCTGGG CGACATCACG ATCTCGGGCC AGTCCCTGGT GGTGGTGGGC GTGACCCTGG TGCTGGTGGC CCTGCTGTTC GTGTTCTTCG AGCGCTCCAT GATCGGCAAG GCGCTGCGCG CCACGGCCAT CAACCGCGTG GGCGCACGCC TCATGGGCAT TCCCACGGCC ATGGCCGGCG ACGTGAGCTT TGCGCTGGCC GCGCTGATCG GCGCCATCTC CGGCCTGCTG ATCGCGCCGC TGACCACGGT GTACTACGAC ACCGGCTTTC TGATCGGCCT CAAGGGCTTC GTGGCCGCCA TCGTGGGCGG GCTGGCCAGC TACCCGCTGG CCCTGGCCGG CGCGCTGCTG GTCGGGCTGC TGGAGGCCTT CTCGTCGTTC TGGGCCAGTG CCTACAAGGA GGTGCTGGTG TTCACGCTGA TCATCCCGGT GCTGTGGTGG CGATCGCGCA ATAGCCACCA TGTGGAGGAA GAAGAATGA
|
Protein sequence | MDLQIALLLG QDGIVNGAVY GLMALALVLV FSVTRIIFIP QGEFVAFGAL TLAMMQAGRV PTTLWLLLAL AAAVLVVDLL RWRAGSQVSW PATFLWCLAL PAIAVALAWG LRPSSLMLQA LATLVLITPM GPLLYRLAYR PLAHASVLML LIVSVAMHGV LVGLGLLFFG AEGSRTPAFS EAQLRLGDIT ISGQSLVVVG VTLVLVALLF VFFERSMIGK ALRATAINRV GARLMGIPTA MAGDVSFALA ALIGAISGLL IAPLTTVYYD TGFLIGLKGF VAAIVGGLAS YPLALAGALL VGLLEAFSSF WASAYKEVLV FTLIIPVLWW RSRNSHHVEE EE
|
| |