| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0561 |
|---|
| Symbol | |
|---|
| ID | 5746104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 615167 |
|---|
| End bp | 616171 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641295630 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001561592 |
|---|
| Protein GI | 160896010 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAT TGCATGCTGA CATTGCTCCG GCCGCTCCCA AGGGGATGCT GCCGCGCCCC
CCGCTGCGGC TGAGCTGCGT GGTGCCAGCC CACAATGAAG AGGGCAACCT GGAGGCGTTC
CTGCGCGCCC TGGACGCGAC GGTGCGCACG CTGACGCCCG ACTACGAGCT GATCGTCGTC
AACGACGGCA GCCGTGACGC CACGCACGAG ATCGCACTGC GCATGGCCCA GGAACTGCCC
GTGCGCTACC TGGCGCTGTC GCGCAACTTC GGCAAGGAGG CGGCGCTGTC GGCCGGCATA
GACCATGCGC GCGGCAACGC CGTCGTGCTG ATCGACGCCG ACTTCCAGCA TCCGCTGGAG
ATGCTGCCCC AGATGTGCGA GCTGTGGCAG TCCGGCTACG ACATGGTCTA TGGCGTGATC
GCCGACCGGG GCGCCGAAAG CGGCGCCAAG CGGGTGGGCA CCAACCTGTT CTACCGGCTC
ATGAATGCCG GCAACCTGGT GAAGATCCCG CCCAATGCCG GCGACTTCCG CTGGCTGGAC
CGCTGCGTGG CCGACGCGCT CAAGGCCCTG CCCGAGAGCC ACCGCTTCAT GAAGGGCCTG
TACGCCTGGG TGGGCTTCAA GGCTGCGGCG CTGCCGTTCG TGCCGGCCGA CCGCACGGCC
GGGGCGTCCA GCTTCAATTT CCGGCGCCTG GGCTCGCTGG CCCTGCTGGG TCTGACCTCG
TTCACCACCT TGCCGCTGCG CGTGTGGAGC GTGGTGGGCG GGATCATCTC GCTGGCGGCC
CTGCTCTACG GCCTGTGGAT CACCATGGAG ACGCTGATCT TCGGCAACCC GCTGGACGGC
TGGCCCACGC TGGCGGCCAG CATCATGCTG TTCTCGGGCG TGCAGCTGAT GTCCATCGGC
ATCCTGGGCG AGTACATCGG CCGCATCTAC GACGAAGTCA AGCGCCGTCC CACCTACCTG
CTGGCGCGCG ACGAAGACCG CAGCCCGCTG GCGCCACGGG ACTAG
|
|---|
| Protein sequence | MTELHADIAP AAPKGMLPRP PLRLSCVVPA HNEEGNLEAF LRALDATVRT LTPDYELIVV
NDGSRDATHE IALRMAQELP VRYLALSRNF GKEAALSAGI DHARGNAVVL IDADFQHPLE
MLPQMCELWQ SGYDMVYGVI ADRGAESGAK RVGTNLFYRL MNAGNLVKIP PNAGDFRWLD
RCVADALKAL PESHRFMKGL YAWVGFKAAA LPFVPADRTA GASSFNFRRL GSLALLGLTS
FTTLPLRVWS VVGGIISLAA LLYGLWITME TLIFGNPLDG WPTLAASIML FSGVQLMSIG
ILGEYIGRIY DEVKRRPTYL LARDEDRSPL APRD
|
|---|
| |