| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0554 |
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| Symbol | |
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| ID | 5746097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 607856 |
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| End bp | 609973 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641295623 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001561585 |
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| Protein GI | 160896003 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.358681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCCGC TTCCCTCACT TTCACGCCTT TCCCCGCGCA ACGCACCCAT GTCCGCAGGA
CTCAATCTGG CCCAGCTCCA GGCCGTCCAC TACACCGAAG GCCCCTGCCT GGTCCTGGCC
GGCGCGGGCT CGGGCAAGAC ACGCGTGATC ACGCACAAGA TCGGGCGCCT GATCGAGATG
GGCATGGCGC CGCGCCGCAT CGCGGCCATC ACCTTCACCA ACAAGGCCGC GGCCGAAATG
CGCGAGCGCG CGGCCGGCCT CATCGGCCGC CAGGCCAAGG ACGTGCTGGT GTGCACCTTC
CACGCCCTGG GTGTGCGCAT GGTGCGCGAG GACGGCCATG TGCTGGGCCT CAAGCCCCAG
TTCAGCATCC TGGACGCCGA CGACGTGACG GGCATCCTCA AGGACTGCTC GGGCGGCACC
ACCGACCTGG CCACGGCGCG CCAGTGGCAG TGGACCATCA GCAACTGGAA GAACGCCGGC
TGGGACAGCC GCAAGGCCCT GGCCATGGCC CAGGACGACA ACGAGCGCAG CACGGCCCTG
ATCATGCAGC GCTACGAAGA GCGCCTGACC GCCTACCAGA GCGTGGATTT CGACGACCTG
ATCGGCATGC CCATGCGCCT GCTCAAGAAC CACATCGAAG TGCGCGAGAA ATGGCAGCGC
CTGCTGGGCC ATGTGCTGGT GGACGAATAC CAGGACACCA ACGCCACGCA GTACGAGCTG
CTCAAGATGC TGGTGGGCAG CCGCGCCCAC TTCACCGCCG TGGGCGACGA CGACCAGAGC
ATCTACGGCT GGCGCGGCGC CACGCTGGAC AACCTCAAGA AGCTGCCGGT GGAGTTCCCG
CAGCTCAAGG TGATCAAGCT GGAGCAGAAC TACCGCTCCA CCTCGGCCAT CCTGCGCGCG
GCCAACAACG TCATCCAGCC CAACCCCAAG CTCTATCCGA AGACGCTGTT CTCGGAGCTG
GGCGAGGGCG AGCCTGTGCG CATCGTGGAC TGCGACACCG AGGAGCACGA GGCCGAGCGC
GCCGTCGCCC GCATCCAGAG CCTGCGAGCG GCCAGCAACC CGCCGCCGGA CTGGAAGGAT
TTCGCCATCC TCTACCGTGC CAACCACCAG GCCAAGCCCT TCGAGAAGGC CTTGCGCAAG
GCCAGCATTC CCTACAAGGT CTCGGGCGGC ACCAGCTTCT TCGACCGCGC CGAGATCAAG
GACCTGTGCG CCTGGTTCCG GCTGTGGATC AACAACGACG ACGACCCCGC CTTCCTTCGC
GCCATCGGCA CGCCCAGGCG CGGCATAGGC CACACCACGC TGGGCAAGCT GGGCGAGTTT
TCCTCGCAGC ACAAGCTCAG CATGTTCGGC GCCCTGTTCG CGCACATGCT GGAAGCGGCC
CTGCCCAAGA AGGCGCATGA CAGCCTGTTG GAGTTCGGCC GCTACATCAA CGACCTCGAA
TACCGCGCCC GCCACACGCT GGGCGCCGAG CAGTCGCGCG GCTTCATGCT CGACTGGCTC
AAGGAGATCG GCTACGAGCA GTACCTCTAC GACAGCGAGG ACAGCGAATC GGTCGCCGCC
GCGCGCTGGA GCAACGTGCT GGAGTTCTGC GACTGGATGG CCCAGCGCGC CGGCGGCCAG
ATCGAGGATG CGGCGGGCAC GACCACGCAC ACCGAGGTCA AGAGCCTGCT GGAAGTGGCG
CGCAACATCG CCCTGCTGTC CACCATCAGC GAGCGCGAGA AGGAGCAGGA CATGGTCATC
CTGTCCACCC TGCACGCCTC CAAGGGCCTG GAATGGCCGC ATGTGATGCT GGTGGGCGTG
ACCGAGGGCA TGCTGCCCTT CAAGCTCGAC GACGACAACG GCCGCCAGCA GAAGGTCAGC
GACGAAACCG CCCAGCGCCT GCAGGAAGAG CGCCGCCTCA TGTACGTGGG CATCACGCGC
GCCCGCCGCT CTCTGGCCGT GAGCTGGACC AAGCGCCGCA AGAAGGGGCG CGAGATGGTC
TCCACCCTGC CCAGCCGCTT CATCAAGGAA ATGGGCCTGG ACGCCGCCAC CTCGCGCGAG
GACCCGCGCG AGAAGCTGCG CCAGCTGCGC GCCGAGTTCG CCCTCAAGGC ACAGCAGTCC
ACGCCCGCCG ACTCCTGA
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| Protein sequence | MLPLPSLSRL SPRNAPMSAG LNLAQLQAVH YTEGPCLVLA GAGSGKTRVI THKIGRLIEM
GMAPRRIAAI TFTNKAAAEM RERAAGLIGR QAKDVLVCTF HALGVRMVRE DGHVLGLKPQ
FSILDADDVT GILKDCSGGT TDLATARQWQ WTISNWKNAG WDSRKALAMA QDDNERSTAL
IMQRYEERLT AYQSVDFDDL IGMPMRLLKN HIEVREKWQR LLGHVLVDEY QDTNATQYEL
LKMLVGSRAH FTAVGDDDQS IYGWRGATLD NLKKLPVEFP QLKVIKLEQN YRSTSAILRA
ANNVIQPNPK LYPKTLFSEL GEGEPVRIVD CDTEEHEAER AVARIQSLRA ASNPPPDWKD
FAILYRANHQ AKPFEKALRK ASIPYKVSGG TSFFDRAEIK DLCAWFRLWI NNDDDPAFLR
AIGTPRRGIG HTTLGKLGEF SSQHKLSMFG ALFAHMLEAA LPKKAHDSLL EFGRYINDLE
YRARHTLGAE QSRGFMLDWL KEIGYEQYLY DSEDSESVAA ARWSNVLEFC DWMAQRAGGQ
IEDAAGTTTH TEVKSLLEVA RNIALLSTIS EREKEQDMVI LSTLHASKGL EWPHVMLVGV
TEGMLPFKLD DDNGRQQKVS DETAQRLQEE RRLMYVGITR ARRSLAVSWT KRRKKGREMV
STLPSRFIKE MGLDAATSRE DPREKLRQLR AEFALKAQQS TPADS
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