Gene Daci_0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0550 
Symbol 
ID5746093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp604927 
End bp605397 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content69% 
IMG OID641295619 
ProductUspA domain-containing protein 
Protein accessionYP_001561581 
Protein GI160895999 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGA TCATGATTGC CGTCGATGGG TCCGAGCCCT CGCTGGATGC CGTGCACCAC 
GCCATCTCCC TGGTGCGCCA GGGCCTGCAG GCGCATTTCG TGCTGGCCCA TGTGCAGCAG
GAAGCCTCGC TGTTCGAGCT GGCCACGCAG GACTCGGACA TGATCGCCGC CGCCAGCGTG
GACGCCGGCA TGCACCTGGT GGCGCCGGCC GTGGCCCTGG TGCGGGCGGC CGGCATTTCC
TACGAGGTGG AGATCGGCCT GGGCGAGCCC GCCGCCGCGC TGGCCGACAT TGCCGAGAGC
ACGGGCTGCG AGCAGATCAT CATCGGCGCA CTGGGCCAGG GCGGCCTGCG GCGCGTGCTG
ATCGGCTCGG TCTCGCGCGA GGTGGCGCGC AACAGCCGGC TGCCTGTGAC CATCGTCAAG
CATGCCGAGC CGCAAGATGA AGAAGGGGAA GAGGACCTGG GTCCCGAGTG A
 
Protein sequence
MLKIMIAVDG SEPSLDAVHH AISLVRQGLQ AHFVLAHVQQ EASLFELATQ DSDMIAAASV 
DAGMHLVAPA VALVRAAGIS YEVEIGLGEP AAALADIAES TGCEQIIIGA LGQGGLRRVL
IGSVSREVAR NSRLPVTIVK HAEPQDEEGE EDLGPE