Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0548 |
Symbol | |
ID | 5746091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 602632 |
End bp | 603582 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641295617 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001561579 |
Protein GI | 160895997 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCAA TCTCCCAGGC CTTTCGCTGT TTTGACGAGG TGGCGCGCCG TGGCTCGGTG CGCAAGGCCG CCGTCACGCT GCACCTGACG GCGGCCGCCG TGAACCAGCA AATCCTCAAT CTGGAGGCCC AGGTCGGCGT GCCGCTGTTC GACCGCCTGC CGCGCGGCAT GCAGCTGACA ACGGCCGGGG AGCTGATGCT GGCGGCCGTG CGGCGCAGCC AGCGTGACTT CGACAACGCG CTGGCCCAGG TGGAGGACCT GCGCGCCCTG CGCCGGGGCC ATGTGCGCGT GGGCGTGTCC CATGCCACGG CCGAGTACCT GCTGCCCCTG GTGATCGCCA GCCTGCACGG GCGCTATCCG GGCATCACCT TCAGCGTGCG TTCGGGCACG GGCGAGGAGC TGCTGCGCGG CGTGGCGCAG GGCGAGATCG ACGTGGCCTA TTGCCTGCGC CGCCCGCCGC CGCCCGGCGT GCAGGAGGTG CGCGCCTGGC CCCAGCCGCT GGGCGCGGTG ATGGCCCCCG GCCATCCGCT GGCCACCGAG CCGCGCCTGC TGCGCCTGCG CGATTGTGTG GACTATCCGC TGATCCTGAT GGCGCCGGGC ATGGAGTTGC GCAGCATGCT GGAGCAGATG GACAGCGCGG CCCTGCACCA GCAGCGGCCG CTGGTGGAGA CCAGCTCCGT GCCCATGGTG CGGCGCCTGG TGGCCGGCAG CACGGCCCTG GGATTCCTGG TGCCCGACAA CGTGGCCGAG GATGTGGCGG CCGGCCGCCT GCTCTGGCGG CCCCTGCATG ACGCAGGTGC GCAGTTGCCC GGCTGCCTGT ACCAGCGCAT CGGCTACACC AAGGCAGCCG CCATGCGGCT GTTTCTGGAC GAGCTGGAGC GCGTGGCCGA CGAGATGCGC GCCGGCTTCG AGACCGGCGT GTCCTGGTCG CTCAAGGACC TGGCGACCTG A
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Protein sequence | MPAISQAFRC FDEVARRGSV RKAAVTLHLT AAAVNQQILN LEAQVGVPLF DRLPRGMQLT TAGELMLAAV RRSQRDFDNA LAQVEDLRAL RRGHVRVGVS HATAEYLLPL VIASLHGRYP GITFSVRSGT GEELLRGVAQ GEIDVAYCLR RPPPPGVQEV RAWPQPLGAV MAPGHPLATE PRLLRLRDCV DYPLILMAPG MELRSMLEQM DSAALHQQRP LVETSSVPMV RRLVAGSTAL GFLVPDNVAE DVAAGRLLWR PLHDAGAQLP GCLYQRIGYT KAAAMRLFLD ELERVADEMR AGFETGVSWS LKDLAT
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