Gene Daci_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0548 
Symbol 
ID5746091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp602632 
End bp603582 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content72% 
IMG OID641295617 
ProductLysR family transcriptional regulator 
Protein accessionYP_001561579 
Protein GI160895997 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCAA TCTCCCAGGC CTTTCGCTGT TTTGACGAGG TGGCGCGCCG TGGCTCGGTG 
CGCAAGGCCG CCGTCACGCT GCACCTGACG GCGGCCGCCG TGAACCAGCA AATCCTCAAT
CTGGAGGCCC AGGTCGGCGT GCCGCTGTTC GACCGCCTGC CGCGCGGCAT GCAGCTGACA
ACGGCCGGGG AGCTGATGCT GGCGGCCGTG CGGCGCAGCC AGCGTGACTT CGACAACGCG
CTGGCCCAGG TGGAGGACCT GCGCGCCCTG CGCCGGGGCC ATGTGCGCGT GGGCGTGTCC
CATGCCACGG CCGAGTACCT GCTGCCCCTG GTGATCGCCA GCCTGCACGG GCGCTATCCG
GGCATCACCT TCAGCGTGCG TTCGGGCACG GGCGAGGAGC TGCTGCGCGG CGTGGCGCAG
GGCGAGATCG ACGTGGCCTA TTGCCTGCGC CGCCCGCCGC CGCCCGGCGT GCAGGAGGTG
CGCGCCTGGC CCCAGCCGCT GGGCGCGGTG ATGGCCCCCG GCCATCCGCT GGCCACCGAG
CCGCGCCTGC TGCGCCTGCG CGATTGTGTG GACTATCCGC TGATCCTGAT GGCGCCGGGC
ATGGAGTTGC GCAGCATGCT GGAGCAGATG GACAGCGCGG CCCTGCACCA GCAGCGGCCG
CTGGTGGAGA CCAGCTCCGT GCCCATGGTG CGGCGCCTGG TGGCCGGCAG CACGGCCCTG
GGATTCCTGG TGCCCGACAA CGTGGCCGAG GATGTGGCGG CCGGCCGCCT GCTCTGGCGG
CCCCTGCATG ACGCAGGTGC GCAGTTGCCC GGCTGCCTGT ACCAGCGCAT CGGCTACACC
AAGGCAGCCG CCATGCGGCT GTTTCTGGAC GAGCTGGAGC GCGTGGCCGA CGAGATGCGC
GCCGGCTTCG AGACCGGCGT GTCCTGGTCG CTCAAGGACC TGGCGACCTG A
 
Protein sequence
MPAISQAFRC FDEVARRGSV RKAAVTLHLT AAAVNQQILN LEAQVGVPLF DRLPRGMQLT 
TAGELMLAAV RRSQRDFDNA LAQVEDLRAL RRGHVRVGVS HATAEYLLPL VIASLHGRYP
GITFSVRSGT GEELLRGVAQ GEIDVAYCLR RPPPPGVQEV RAWPQPLGAV MAPGHPLATE
PRLLRLRDCV DYPLILMAPG MELRSMLEQM DSAALHQQRP LVETSSVPMV RRLVAGSTAL
GFLVPDNVAE DVAAGRLLWR PLHDAGAQLP GCLYQRIGYT KAAAMRLFLD ELERVADEMR
AGFETGVSWS LKDLAT