| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0544 |
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| Symbol | |
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| ID | 5746087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 598230 |
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| End bp | 599474 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641295613 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001561575 |
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| Protein GI | 160895993 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCCC ATGAGGGCCG CCGGCCCGCC GCGCTTCTTC GCATGCCCGT GCTTTCCTCC
ATTTCTCGGA ATTTCCCGGA CCGTCTCCTG TGGGGGCCGA AGCCGGCGTC GCCGTTGGTG
GACGAGGCGC TGCATCTGGA GCGCTGGAAG CGCCGCACCT GGCAACTGCA CATCTCCGTG
CTGGTCAGCC ATATCTATGC GCTGCTGCTG TTTCTGGGCC ATGCCTGGGC CGGCTATGCG
CCCTGGGCCG TGGTGCTGGG CTATGGCCTG TGGGTGGCGG CGGGCATGGG CTTCATCACC
TGGGCCTATG CCAGCGACTG GTGCCACAGG CTGCGCGATC CGGGCATGTT CCTCACGCAC
CAGCTGGTGT CCATCATCGG CGTTCTGGGC ATGGTCATGG CCGCCCCTGC GCTGGCGTTC
CAGTCCATGG TGATGCTGAT CGCCTTCAGC GCCGACGGTT TCCTGGCGCG CAGCCGCACG
AGCTTCTGGC TGACCTGGAT GGGCACGCTC ATCGCCGTGG CGGCCATCAT TCTCTGGAGG
GGGCCGCTGA TGCGCATGAC CACGGACACG GCTGCAGGCC AGTTGCTGGC CTTCGGCGTG
GTGCTCGGTG CCGTGGTGCG CTGCAGCGTG CAGGCCACCT TCTTTCGCAG CATGCAGTAC
CGGCTGGGCA TCGCCAATGA CAAGCTGGCC ACGGCGCTGG CGCAGATCGA GGCCCTGCTG
CGCCATGACG ACCTGACCGG CGTCAGCAAC CGCCGGGGCG TGATCGAGCG GCTGCACGAG
GTGCGCACCG CCGCCCACGA CCGCGGCACG GTGCTGTGCG TGGCGCTGCT GGACATAGAC
CACTTCAAGC GCATCAACGA CAGCTTTGGC CATGAGGGCG GCGACCGCGT GCTGCGCGCC
TTCGGAACGC TGCTGAAGTC GCAGTTGCGC AGTGCCGATG GCGTGGGCCG CTATGGCGGT
GAGGAGTTCC TGCTGGTGCT GCCCGACACC GACCTGGCCC AGGCCGGCGA ACTGCTGGAG
CGCCTGCGCC TGCGCATTGC CGAAGCCCCG TGGACGCAGA CCCTGGGCGA GGGCGCCCGC
GTCACCTGCA CGCTGGGCGC CGCACAGTAC CGCGCGGGCG AGTCGGTGGA GGCGACCATT
GCGCGTGCCG ATGCGGCGCT TTACCGTGGC AAGGCCCAGG GCCGCAACTG CACCGTGCTG
GAGCCGCAGC AGGCCCGGCC GGCCCCCAGC GCAACGCCTG CCTGA
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| Protein sequence | MGAHEGRRPA ALLRMPVLSS ISRNFPDRLL WGPKPASPLV DEALHLERWK RRTWQLHISV
LVSHIYALLL FLGHAWAGYA PWAVVLGYGL WVAAGMGFIT WAYASDWCHR LRDPGMFLTH
QLVSIIGVLG MVMAAPALAF QSMVMLIAFS ADGFLARSRT SFWLTWMGTL IAVAAIILWR
GPLMRMTTDT AAGQLLAFGV VLGAVVRCSV QATFFRSMQY RLGIANDKLA TALAQIEALL
RHDDLTGVSN RRGVIERLHE VRTAAHDRGT VLCVALLDID HFKRINDSFG HEGGDRVLRA
FGTLLKSQLR SADGVGRYGG EEFLLVLPDT DLAQAGELLE RLRLRIAEAP WTQTLGEGAR
VTCTLGAAQY RAGESVEATI ARADAALYRG KAQGRNCTVL EPQQARPAPS ATPA
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