| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0542 |
|---|
| Symbol | |
|---|
| ID | 5746085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 595690 |
|---|
| End bp | 596814 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641295611 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001561573 |
|---|
| Protein GI | 160895991 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.884235 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGG CTCTGCGTCT GCCCGAGAAA TGGTTCCGCC GAGGCCTGTG GCTGGTGGCG
GTGGTGTTCG CCTCCTTCCT CATCGGCCTG GGCGGCCTGG TGGTGGGGGA CCTGCCCCAG
GTCGAGTCGC CGCGCACGGT GGAGGACTTC ATTGCGCCGG CTGCGGCCGA GCCCGTCAAG
GCCGAGATCA AGGCCGCCGA TGCCGATCAC GACAAGGCGG AGACGGCGCT GCAGAACGCG
CGCCTCAAGT ACCAGGCCAC GCAGGCGCGC TACCGCTCTG CGCGCGAGAC CTTCGACAAC
TGGGTGGCCA CGCGCCGCGC CACGGCCCGG CCCGAGCAGG ACAGCGAGCT GCTGTCGCGC
ACCCAGGCGC TGGATGCCAT CAAGCAGGAA GAGAACGCCG CACGCGCTGC AGTGGAGCGG
CTGCAGGACG CCAGCCTGCA GGCACGCCAG CGCCTGGACG CGGCCAACCG CCAGTGGGAC
GGTCTGCGCG ACGGTGCCAT GCAGGCCTGG CGCAAGGAGA TGCGCGCCAT CGAGCTGCGC
GTCTTCCTCT ACCGCCTGGC GCTGACCCTG CCCCTGCTGC TGGTGGCCGG CTGGCTGTTC
GCCAAACAAC GCAAGAGCAC CTGGTGGCCC TTTGTCTGGG GCTTCATCTT CTTTGCGCTG
TTCGCCTTCT TCGTCGAACT CGTGCCCTAT CTGCCCGACT ACGGCGGCTA CGTGCGCTAT
GTGGTCGGCA TCGTGGTGAC GGTGCTGCTG GGACGCGCGG CCATTCTGGG CCTGAACCGC
TACCTGGAGC GGCAAAAGCA GCAGGAGTCA CTGCCTGAGA CGCAGCGGCG CCAGGAACTG
GGCTACGACG TGGCCCTGGC CCGCCTGGCC AAGGGCGTAT GCCCGGGCTG CGAGCGCCCC
GTGGACCTGA AGGACGGCGC CATCGATTTC TGCCCCCACT GCGGCATAGG CCTGTTCGAC
CGTTGCGGCA GCTGCAATAC CCGCAAGAGC GCCTTTGTGC ACTATTGCCA CAGCTGCGGC
ACCCAGGCCG ATGGCAACCG CAGGAAGCCG GGAGCGGTGT TGCCTTCCAC GTCTGCTGCG
CCTGCCGTGC CTCCCGTGCA GGAGGCCGGG CCGGCGGCGG GTTGA
|
|---|
| Protein sequence | MSKALRLPEK WFRRGLWLVA VVFASFLIGL GGLVVGDLPQ VESPRTVEDF IAPAAAEPVK
AEIKAADADH DKAETALQNA RLKYQATQAR YRSARETFDN WVATRRATAR PEQDSELLSR
TQALDAIKQE ENAARAAVER LQDASLQARQ RLDAANRQWD GLRDGAMQAW RKEMRAIELR
VFLYRLALTL PLLLVAGWLF AKQRKSTWWP FVWGFIFFAL FAFFVELVPY LPDYGGYVRY
VVGIVVTVLL GRAAILGLNR YLERQKQQES LPETQRRQEL GYDVALARLA KGVCPGCERP
VDLKDGAIDF CPHCGIGLFD RCGSCNTRKS AFVHYCHSCG TQADGNRRKP GAVLPSTSAA
PAVPPVQEAG PAAG
|
|---|
| |