| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0539 |
|---|
| Symbol | |
|---|
| ID | 5746082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 593814 |
|---|
| End bp | 594287 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641295608 |
|---|
| Product | YiaAB two helix domain-containing protein |
|---|
| Protein accession | YP_001561570 |
|---|
| Protein GI | 160895988 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4298] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.305268 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCTT CTCCCATCGT CGTTCAGCGT GATACCCGGG CCTGGCAACT GCAGGTGTGG
GTGTCGTTCG GCATTGCGGT CTCGCTGTGC GCCATCGGCC TGGCATGGCT GCCCGGCGAG
CAGCTGGAGC AGGCCTTCAT GGTGATGGGC TATGTGTTCT GCCTCTCGGC CGCCTTCGTG
CTGGCCAAGT TCGTGCGGGA CAACGAGGGC GGCCGCAGCG GCGCAGGCGA CACGCCCATG
TGGAAGCTGG TGGTCTGGGG CGGCTTTGCC GTGTCCATGG CGCTGACTGG CTGGGGGCTG
GTGAGCATGG ACATCAACGT GACCTACAAG GCCTTCCTGG GCGTGAGCTG GCTCTATCTC
ATCACCACCG CCTTCACGCT GGCCAAGATG CTGCGCGACC GCCACGAGGC CGACCTGGCG
CAGGCCCGCA TGCATGGCCG CCGCGAGGCC GCGCAACCGG CCGACGCCGA GTGA
|
|---|
| Protein sequence | MSSSPIVVQR DTRAWQLQVW VSFGIAVSLC AIGLAWLPGE QLEQAFMVMG YVFCLSAAFV
LAKFVRDNEG GRSGAGDTPM WKLVVWGGFA VSMALTGWGL VSMDINVTYK AFLGVSWLYL
ITTAFTLAKM LRDRHEADLA QARMHGRREA AQPADAE
|
|---|
| |