| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0533 |
|---|
| Symbol | |
|---|
| ID | 5746076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 586925 |
|---|
| End bp | 587959 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641295602 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001561564 |
|---|
| Protein GI | 160895982 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.00396923 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGATTCACC GGATTTCCCT GCACACCATG CGCCCCTCGT TTTTCCGCTC CTGGATTCCC
GCCGCCGCCG CGGCCCTGGC CGTCTTCGGC TCCACCGCAG CGGTGGCAGC CGATTCGGCG
GCTTCGTGGC CGCACCAGCC CGTGACCATG ATCCTGGGCT TCCCGGCAGG CTCGGGCGTG
GACGTGATCG CGCGCGGCGT GCAGGAGCCG CTGTCCCAGC GCCTGGGCCA GCCGCTGATC
ATTGACTACA AGTCGGGAGC GGCCGGCAAC ATCGCCAGCG AGATCGTGGC GCGCGCCAAG
CCGGACGGCT ACACGCTGGC CTTCGGCACG GCCGCCACGC ACGGCAGCAA TGCGGCGCTG
TACAAGAAGC TGCCCTTCGA TGTGGAAACC GACTTCGTGC CGGTGGCGCC GCTGATCGAT
GTGTCCAACG TGCTGACCAT CAACCCCAAC GTGATCAACG TCAAGAACCT CAAGGAGTTC
GTGGACGAGA TCAAGGCCAA CCCCGGCAAG TACAACTACG CCTCCACGGG CAACGGCGCG
GGCACGCACA TGGCCTTTGC CGAGTTCAAT GCGCGCCTGG GCCTGAACAT GGTCCATGTG
CCCTACAAGG GTGGCCCCGA GGCCATCACC TCGGTGCTGC GCGGCGAGAC CTGCTGCATC
ATGAACCAGG TCCAGACCGT GCTGCCCCAC TACAAGAGCG GCAAGGTGCG CCTGCTGGGC
GTGACCACGG CCAAGCCCGT GGAAGTCATC AAGGAAGTGC CCACCATCGC CTCCAGCGGC
CTGACGGGCA CCAAGGGCTT CGACAGCTCG ATCTGGTTCG GCATCTTCGC GCCCAAGGGC
ACGGACCCGG CCATCGTGGC CAAGCTCAGC CAGGCCGTGC GCGAGGTGCT GGAGCTGCCC
GAGGTGCGTG CGCGCTTCGA GTCCCAGGGC AATGCGATCC GCATCGAAAC GCCCGAGCAG
TTCAAGAAAA CCGTGCACAA CGACCGCCTG AAGTGGGCAC AGGTGGTCAA AGACGCGAAA
ATCAGCATCG ATTGA
|
|---|
| Protein sequence | MIHRISLHTM RPSFFRSWIP AAAAALAVFG STAAVAADSA ASWPHQPVTM ILGFPAGSGV
DVIARGVQEP LSQRLGQPLI IDYKSGAAGN IASEIVARAK PDGYTLAFGT AATHGSNAAL
YKKLPFDVET DFVPVAPLID VSNVLTINPN VINVKNLKEF VDEIKANPGK YNYASTGNGA
GTHMAFAEFN ARLGLNMVHV PYKGGPEAIT SVLRGETCCI MNQVQTVLPH YKSGKVRLLG
VTTAKPVEVI KEVPTIASSG LTGTKGFDSS IWFGIFAPKG TDPAIVAKLS QAVREVLELP
EVRARFESQG NAIRIETPEQ FKKTVHNDRL KWAQVVKDAK ISID
|
|---|
| |