| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0525 |
|---|
| Symbol | |
|---|
| ID | 5746068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 566338 |
|---|
| End bp | 566850 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641295594 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001561556 |
|---|
| Protein GI | 160895974 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2847] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.527172 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00000658368 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACACTGC GTCAATGGAC CACCCCTTTC CTGATCGCCG CCTCCCTGTC CATGGGCCTG
GCCCATGCCC ATGCCGATGC CGCCCACGTC AAGGCCGACG CCGCCTGGGC GCGTGCCAGC
GTGCCGGGCC AGCAGGCCAC GGGCGCCTTC ATGCGCCTGA CGGCGGAGGA GCCGCTGCGC
CTGGTGGGTG TGGAGTCGCC CGCCGCCGGC TTGGCCGAGG TGCATGAAAT GAAGATGGAA
GGCGATGTGA TGCGCATGCG CGCCATCGAC GGCCTGGACC TGCCCAAGGG CGTGGCCGTG
GACCTGAAGC CCGGCGGCTA CCACGTCATG CTGCAGCAGC TCAAGAGCCC GCTGCTCAAG
GACAGCCAGG TGCCCATCAC CCTGGTGTTC AAGGACGCCA AGGGCGAAAC CTCGCGCCTG
AGCCTGCAGG TCCCCGTGCG CGCCATGGCG CCCGGCGCGG CGGCTGCCCC GGCAGCGGGC
CACGGCGGCG GCCACGCAGG CCATTCGCAC TGA
|
|---|
| Protein sequence | MTLRQWTTPF LIAASLSMGL AHAHADAAHV KADAAWARAS VPGQQATGAF MRLTAEEPLR
LVGVESPAAG LAEVHEMKME GDVMRMRAID GLDLPKGVAV DLKPGGYHVM LQQLKSPLLK
DSQVPITLVF KDAKGETSRL SLQVPVRAMA PGAAAAPAAG HGGGHAGHSH
|
|---|
| |