| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0522 |
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| Symbol | |
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| ID | 5746065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 562874 |
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| End bp | 565081 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641295591 |
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| Product | exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_001561553 |
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| Protein GI | 160895971 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.496827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000245551 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCCGC GCCCCCGTTC GCGGACCGTC GATACGGCCA CGCTGGATCT GTTCGACGAA
CGGCCGGGCG ACGACTCGCC GGGCGGCGAA ACGCCAGGCG ACGCATCGCT GGGCGGCAAA
CCGCCGGGCG CCGTGCCGCC AGACACCAAT GAACTGCTGG CCCTGCTGCG CCGCTGGGCC
GATGCCGGCC TGCTGCGGCG CCTGGATGCG GCGCTGGCCT CATTCGTCGC CGGGCAGGAT
GCGCAGGCCG GGCCCGCCTT GCTGGTGGCG GCCGCGCTGC TGGCGCAGAT GGAGGGGCGC
GGCCACAGCT GCCTGCCCCT GGCACCGCTG GCCGGCAACC CCAACGACGT GCTGGCCTGG
CCCGCCGAGG CGCTGCCCGC GCAGCAGGCC CTGTGGCAGA TACTGCCCGC GCGCCTGTCC
GGCTGGGTGG CTGCGCTGGG TGCCAGCCCC GTGGTGCGCG TGGTCGGCGA CGCGGGCCAG
GATGGCGGCG AGGACCTTGG CCAGCCCCTG GTGCTGGCCG GTGCCGACGG CCCCGCGCCG
CTGCTGTACC TGCGCCGCTA CTGGGACTAC GAGCGCGCCG TGGCCATCCA TGTCATCCAG
CGCACGGCGG TGCAGGCCGT GGCCGCCCAG CCGCTGGACG AAGCCCTGGC CCGCCACTGG
CTGGACCGCC TGTTCCCGCC TGCGGCGGGA GGCGGCCCCG TGGACTGGCA GAAGCTGGCC
TGCGCGCTGG CGCTGCGCGG CCGGCTGTCG GTGATCACGG GCGGCCCCGG CACCGGCAAG
ACCTATACCG CCGCGCGGCT GCTGGCCCTG CTGTTTGCCA CGGCGCCCGA CGCCGGCCAG
CTGCGCGTGG CCCTGGCCGC CCCCACGGGC AAGGCGGCTG CGCGCCTGAA GCAATCGATT
GACGGGGCCT TGCTGCAATT GCAGGGCAGC ATGGGCGGCG AGATCGACCT GGCGGGCCTG
GTGCAGCGCA TGGGCGCGGC GCGCACCCTG CACTCCATGC TGGGCGCGCG GCCCGATACG
CGGCACTGGG GATTCCATGC GGGCCGGCAA CTGGACGTGG ATGTCCTCAT CGTCGATGAG
GCCTCCATGG TCCACCTGGA GATGATGGCG GCGCTGCTGG AGGCACTGCC GGCCGGCGCC
CGCCTGGTGC TGCTGGGCGA CAAGGACCAG CTGGCATCGG TGGAGGCGGG CGCCGTGCTG
GGCGACCTGT GCCGCGATGC CCAGGCCGGA CGCTACCTGC CGGACACGCT GGACTACGCG
CTGCGCGTGG CCGACCAGGC GGTGCCGCCG CAGTTCGCGG CGCCGGCAGG CGACCGTCCT
CCGGCTCTTG CACAGCACAC CGTCATGCTG CGCGAAAGCC GGCGCTTCGG TGGCCCCATC
GGCCAGTTGG CGCGCGCCGT GAATGCCGGC CACGCCGCGC AGGCCCAAGC CTTGCTCGAT
GCCGGCACGC AAGGCGGTAC GCACTCCGAA CTCTGGGAGC GCCAGGGCGG CGGCGTGCAG
GCCGTGACCG AACTGGCCGT GGGTGGGCGT GGCGGCCTGG CCAGCTATGC GCTGTATGCC
AGGGCGCTTC AAAACAGGCC GGCTGCGGAC GGCGACTACG AGGCCGCGCA CCGGGCCTGG
GTGATCGATG TGCTGCAGGC CTTCGAGCGC TTCCGGCTGC TGTGCGCCGT GCGCGAGGGG
GACTGGGGCG TGTCCGGCCT CAACCGGGCG GTGGAGCAGG CCCTGGAAGC GCAGGGCGCC
ATCCGCCGCA GCGGCGAATG GTATGCGGGC CGGCCCGTCA TGGTCACGCG CAACGATGCG
CAGCTGGGCG TGTTCAACGG TGACATCGGC ATTGCGCTGC CGGGTGGGTC GCAGGGCGGG
TCGCATGGCG GGTCACAGGG GGGCCCGCAG GGTGGGCCCG GGCAGCCGCT GCGCGTGTAC
TTCCTGCAGG GTGACGAGCT GCGCTCGGTC GGTGTCAGCC GCCTGGCCCA TGTGGAGACC
GCCTTCGCCA TGACGGTGCA CAAGAGCCAG GGCTCGGAGT TCGAGCACAC GGCCCTGGTG
CTGCCCTCGC GCGGCGGCAG CGTGCTGGGG CGCGAGCTGG TCTACACCGG CATCACGCGC
GCCCGCCAGG CCTTCTCGCT GTTCTCCGAG GTGCCGGGCC TGCTGGCCTC GGCCGTTGGC
AGCCCCACGC AGCGCGCCAG CGGGCTGTTG CGCTGGCTGC AGGACTGA
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| Protein sequence | MSPRPRSRTV DTATLDLFDE RPGDDSPGGE TPGDASLGGK PPGAVPPDTN ELLALLRRWA
DAGLLRRLDA ALASFVAGQD AQAGPALLVA AALLAQMEGR GHSCLPLAPL AGNPNDVLAW
PAEALPAQQA LWQILPARLS GWVAALGASP VVRVVGDAGQ DGGEDLGQPL VLAGADGPAP
LLYLRRYWDY ERAVAIHVIQ RTAVQAVAAQ PLDEALARHW LDRLFPPAAG GGPVDWQKLA
CALALRGRLS VITGGPGTGK TYTAARLLAL LFATAPDAGQ LRVALAAPTG KAAARLKQSI
DGALLQLQGS MGGEIDLAGL VQRMGAARTL HSMLGARPDT RHWGFHAGRQ LDVDVLIVDE
ASMVHLEMMA ALLEALPAGA RLVLLGDKDQ LASVEAGAVL GDLCRDAQAG RYLPDTLDYA
LRVADQAVPP QFAAPAGDRP PALAQHTVML RESRRFGGPI GQLARAVNAG HAAQAQALLD
AGTQGGTHSE LWERQGGGVQ AVTELAVGGR GGLASYALYA RALQNRPAAD GDYEAAHRAW
VIDVLQAFER FRLLCAVREG DWGVSGLNRA VEQALEAQGA IRRSGEWYAG RPVMVTRNDA
QLGVFNGDIG IALPGGSQGG SHGGSQGGPQ GGPGQPLRVY FLQGDELRSV GVSRLAHVET
AFAMTVHKSQ GSEFEHTALV LPSRGGSVLG RELVYTGITR ARQAFSLFSE VPGLLASAVG
SPTQRASGLL RWLQD
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