Gene Daci_0514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0514 
Symbol 
ID5746056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp550099 
End bp550662 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content69% 
IMG OID641295582 
Productputative proline rich signal peptide protein 
Protein accessionYP_001561545 
Protein GI160895963 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.268844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGGCCG GCGTGCTGGC GGGCCTGAGC CTGCAGGCCA GGGCCGATGC CCTGACGGCC 
GAGATCGGCC CCATGCAGCT CGATCGCTCC GACGACGGCC TGCTGCTGTC GGCCACCCTC
CATTTCGAGC TGCCCTACCA GATCGACGAT GCGCTGCGCC AGGGCATCCC CATGTACTTC
GTGGCCGATG CCCAGATCCA GCGCGAGCGC TGGTACTGGT CCGATCAGCA ACTGGCCACC
GCCAGCCGCC ACTACCGCCT CAGCCACCAG CCGCTGACGC GCCGCTGGCG CCTGCACATC
TCCAGCACCC CGTTCTCCAG CAGCGGCCTG GGGCTGGCGC TGGGCCAGAC CTTCGAAAGC
CTGGACGATG CGCTGGCCTC CATGCAGCGC ATCTCGCGCT GGAAGATCAT GGACACGGCG
CCCACGCAAT CGGGCGTATC GGTGCAACTG CGCTTTCGCA TCGACCTGTC CCAGCTGCCC
AGGCCGCTGC AGATCGGCGC GCTGGGCCGC TCGGGCTGGA ACCTGCAGCT GTCGCGCACC
CAGATGCTGG AAGACGCGCC ATGA
 
Protein sequence
MLAGVLAGLS LQARADALTA EIGPMQLDRS DDGLLLSATL HFELPYQIDD ALRQGIPMYF 
VADAQIQRER WYWSDQQLAT ASRHYRLSHQ PLTRRWRLHI SSTPFSSSGL GLALGQTFES
LDDALASMQR ISRWKIMDTA PTQSGVSVQL RFRIDLSQLP RPLQIGALGR SGWNLQLSRT
QMLEDAP