| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0513 |
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| Symbol | |
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| ID | 5746055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 548646 |
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| End bp | 550034 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641295581 |
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| Product | sun protein |
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| Protein accession | YP_001561544 |
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| Protein GI | 160895962 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.426723 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAC GCACGCATTC TTCCCCGCGC CGCGCTGCGG CGCCTTCGCA GGCACCTGCC
GCACCGCCTC TTTGGCAGCA GCTCGACGCC GTCGCCCAAT GCCTGCAGTC CGTGCTTGAA
GGCCAGTCCA GCCGCAGCGT GCTGGCGCGC GTGGCGCAGC CGCTGCGCCC CGGCGTCCAG
GCGCTGCTGT TCCAGGTACT GCGCCAGTTG GGCCGTGCCC AGGCGCTGCA AAAGCAGCTG
GCCTCGCGCA ACCCGCCGCC GCGCGTCAGC GCATTGCTGA ACACGGCCCT GGCCCTGGCC
TGGGATGAGT CCCGGGCACC GTACCCGCCA TTCACCCTGG TCAACCAGAC GGTGGAAGCT
GCCAAGCAGG GGCCCACGCG CGCCCAGTCC GGCTTCATCA ATGCCTGCCT GCGCCGCTTC
CTGCGCGAGC GCGATGCCCT GGTCGCCGCC ACCGACGACC AGCCGCAGGC CGTCTGGAAC
CACCCGGCCT GGTGGATCGC CCGTTTGCGC AAGGACCATC CCGATCATTG GCAAGCCATC
CTGCAGGCCA ACAATGAACA GCCGCCGATG ACGCTGCGCG TCAACCGCCA ACAAACGGAC
CGCCAGTCCT ACCAGGCAGC GCTGCAGGCC ATGGACGTGC CTTCGCTGGC CGTGGCCGAC
AGCGGCCTGC AACTGCAGCA GGCCCTGCCG GTGCAATCCC TGCCGGGCTT CGACGAAGGC
CTGGCCTCGG TGCAGGATGC GGCCGCGCAA CTGGCCGCGC CGCTGCTGCT GCAGGGGCTG
GAGCAGCCCG CCGGCCGCGC GCTGCGTGTG CTCGATGCCT GCGCCGCCCC GGGCGGCAAG
ACGGCCCACC TGCTGGAGTA CGCAGCCCCG CAGACCCTGG AGGTCACGGC GCTGGAGATA
GATGCCGAGC GCGCCGCGCG CATCGCGGAC ACGCTGGGGC GGCTGCGCCT GCAGGCCCGT
GTGGTGGTGG CCGATGCATC CCGGCCCGAC CAGTGGTTCG ATGCGCAATG CGGCGGCCAG
CGGTTCGACG CCATCTTGCT GGACGCACCC TGCACGGCCT CGGGCATCGT GCGGCGCCAG
CCCGACGTGC GCTGGCTGCG CCGCGAAAGC GATGTGCGCC AGCTGGCCGA GATCCAGGCG
CGCCTGCTCG ACACCCTGTG GCCCCTGCTG CAGCCCGGCG GGCGCCTGCT CTACTGCACC
TGCTCGGTCT TCAGGGAAGA GGGCGAGGCA CAGGTTCAAG CGTTTGTTAC ACGCAACAGT
GAGGCGCGAA CCCTGGCGGC ACCGGGGCAT TTAATCCCGG GCAAAGCCGA CAAAGCCGGC
ATGCTGGCTG ACAATGCTTT GGGTGACCAC GACGGTTTCT TCTACGCCTT GCTGCAAAAG
ACGCGCTGA
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| Protein sequence | MNQRTHSSPR RAAAPSQAPA APPLWQQLDA VAQCLQSVLE GQSSRSVLAR VAQPLRPGVQ
ALLFQVLRQL GRAQALQKQL ASRNPPPRVS ALLNTALALA WDESRAPYPP FTLVNQTVEA
AKQGPTRAQS GFINACLRRF LRERDALVAA TDDQPQAVWN HPAWWIARLR KDHPDHWQAI
LQANNEQPPM TLRVNRQQTD RQSYQAALQA MDVPSLAVAD SGLQLQQALP VQSLPGFDEG
LASVQDAAAQ LAAPLLLQGL EQPAGRALRV LDACAAPGGK TAHLLEYAAP QTLEVTALEI
DAERAARIAD TLGRLRLQAR VVVADASRPD QWFDAQCGGQ RFDAILLDAP CTASGIVRRQ
PDVRWLRRES DVRQLAEIQA RLLDTLWPLL QPGGRLLYCT CSVFREEGEA QVQAFVTRNS
EARTLAAPGH LIPGKADKAG MLADNALGDH DGFFYALLQK TR
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