| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0507 |
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| Symbol | rplA |
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| ID | 5746049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 537378 |
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| End bp | 538073 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641295575 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001561538 |
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| Protein GI | 160895956 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGT TGACCAAGAA GCAAAAGGCT CTCCAGGGCA AGGTGGAGTC CACCAAGCTG
TACGCTTTCG CTGACGCAGT CGCGCTGGTG AAGGATGCTG CAACCGCCAA GTTCGATGAA
TCCATCGACG TGGCCGTGCA ACTGGGCGTG GACGCCAAGA AGTCTGACCA AGTGGTTCGC
GGCGCTGTCG TGCTGCCCCA TGGCACCGGC AAGGTTGCCC GCGTGGCTGT GTTCGCCCAA
GGCGCCAAGG CTGAAGAAGC CAAGGCTGCC GGCGCCGACG TGGTCGGCAT GGACGACCTG
GCTGCCCGCG TGAAGGCTGG CGACATGCCC TTCGACGTGG TCATCGCTGC CCCCGACGCC
ATGCGCGTTG TCGGTACGCT GGGCCAGATC CTGGGCCCGC GCGGCCTGAT GCCCAACCCC
AAGGTTGGCA CGGTGACTCC CGATGTGGCC ACGGCTGTGA AGAACGCCAA GGCTGGTCAG
GTGCAATACC GCGTCGACAA GGCCGGCATC ATCCATGCCA CCATCGGCCG CCGCTCGTTC
GACAACGAGA AGCTGCAAGG CAACCTGGCT GCGCTGATCG ACGCCCTGAA CAAGTCCAAG
CCCGCTTCGA GCAAGGGCCT GTACCTGCGC AAGGTCGCTG TTTCGTCGAC CATGGGTGTG
GGCGTTCGCG TCGACACGCA AACCATCTCG GCCTGA
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| Protein sequence | MAKLTKKQKA LQGKVESTKL YAFADAVALV KDAATAKFDE SIDVAVQLGV DAKKSDQVVR
GAVVLPHGTG KVARVAVFAQ GAKAEEAKAA GADVVGMDDL AARVKAGDMP FDVVIAAPDA
MRVVGTLGQI LGPRGLMPNP KVGTVTPDVA TAVKNAKAGQ VQYRVDKAGI IHATIGRRSF
DNEKLQGNLA ALIDALNKSK PASSKGLYLR KVAVSSTMGV GVRVDTQTIS A
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