Gene Daci_0504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0504 
SymbolsecE 
ID5746046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp535837 
End bp536220 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content57% 
IMG OID641295572 
Productpreprotein translocase subunit SecE 
Protein accessionYP_001561535 
Protein GI160895953 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0690] Preprotein translocase subunit SecE 
TIGRFAM ID[TIGR00964] preprotein translocase, SecE subunit, bacterial 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACTA CTCAGGTTGA AACGGTCAGC TCCGGAGCTG ACAAAGCCAA GCTTGCCGCA 
GTCGCGGCTT TAGTCGTTGC TGCGATCGCA GGTTTCTATC TGCTGAGCAA GCAAGGGCCC
ATCGTCCAGT GGCTGGTGTT GCTGGTCGGC CTGGCTGCAG CTGCTGGCAC GTTCCTTGTT
TCCGAGCCCG GAAAGCGTTT CGTGAGCTTT GCCCAGGATG CCTGGCGCGA AGTCAAGAAG
GTCGTCTGGC CGACGCGCAA GGAAACCATG CAGATGACCT TGTACGTCTT CGGCTTTGTC
GTCATCATGG CCTTGTTCCT GTGGTTCACG GACAAGACGC TTGAGTGGGT CTTGTACGAC
CTGATTTTGG GCTGGAGGAA GTAA
 
Protein sequence
MATTQVETVS SGADKAKLAA VAALVVAAIA GFYLLSKQGP IVQWLVLLVG LAAAAGTFLV 
SEPGKRFVSF AQDAWREVKK VVWPTRKETM QMTLYVFGFV VIMALFLWFT DKTLEWVLYD
LILGWRK