Gene Daci_0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0503 
Symbol 
ID5746044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp534475 
End bp535665 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content62% 
IMG OID641295570 
Productelongation factor Tu 
Protein accessionYP_001561534 
Protein GI160895952 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAG CAAAATTCGA GCGTACCAAG CCGCACGTCA ACGTTGGCAC CATCGGTCAC 
GTGGACCACG GCAAGACGAC CCTGACGGCT GCTATCGCTA CCGTTCTGTC CAAGAAGTTC
GGCGGCGAAG CCAAGGCTTA CGACCAGATC GACGCAGCAC CTGAAGAAAA GGCTCGCGGC
ATCACGATCA ACACCGCCCA CGTCGAGTAC GAAACGGCCG GTCGCCACTA CGCTCACGTT
GACTGCCCCG GCCACGCCGA CTACGTCAAG AACATGATCA CCGGCGCTGC TCAAATGGAC
GGCGCCATCC TGGTGTGCTC GGCCGCTGAC GGCCCCATGC CCCAGACCCG CGAGCACATC
CTGCTGGCCC GTCAGGTGGG CGTGCCCTAC ATCATCGTGT TCCTGAACAA GTGCGACATG
GTGGACGACG AAGAGCTGCT GGAACTGGTC GAAATGGAAG TGCGCGAGCT GCTTGCCAAG
TACGACTTCC CCGGCGACGA CACCCCCATC ATCCGCGGCT CGGCCAAGCT GGCCCTGGAA
GGCGACCAGT CCGACAAGGG CGAAGCTGCC ATCCTGCGCC TGGCTGAAGC ACTGGACTCC
TACATCCCCA CGCCCGAGCG CGCTGTGGAC GGTGCCTTCG CCATGCCCGT GGAAGACGTG
TTCTCGATCT CTGGCCGTGG CACCGTGGTG ACTGGCCGTA TCGAGCGCGG CATCATCAAG
GTCGGCGAAG AAATCGAAAT CGTCGGTATC CGCGACACCC AGAAGACCAT CGTCACCGGC
GTGGAAATGT TCCGCAAGCT GCTGGACCAA GGTCAAGCTG GCGACAACGT GGGTCTGCTG
CTGCGCGGCA CCAAGCGTGA AGACGTGGAA CGCGGCCAAG TGCTGTGCAA GCCCGGCTCC
ATCAAGCCCC ACACCCACTT CACGGCTGAG GTGTACGTGC TGTCCAAGGA CGAAGGTGGT
CGCCACACTC CGTTCTTCAA CAACTACCGT CCCCAGTTCT ATTTCCGCAC GACCGACGTG
ACCGGCTCCA TCGAGCTGCC CGCCGACAAG GAAATGGTGA TGCCTGGCGA CAACGTGTCG
ATCACCGTCA AGCTGATCGC CCCCATCGCC ATGGAAGAAG GTCTGCGCTT CGCTATCCGC
GAAGGTGGCC GTACCGTGGG CGCTGGCGTG GTTGCCAAGA TCATTGCCTA A
 
Protein sequence
MAKAKFERTK PHVNVGTIGH VDHGKTTLTA AIATVLSKKF GGEAKAYDQI DAAPEEKARG 
ITINTAHVEY ETAGRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLARQVGVPY IIVFLNKCDM VDDEELLELV EMEVRELLAK YDFPGDDTPI IRGSAKLALE
GDQSDKGEAA ILRLAEALDS YIPTPERAVD GAFAMPVEDV FSISGRGTVV TGRIERGIIK
VGEEIEIVGI RDTQKTIVTG VEMFRKLLDQ GQAGDNVGLL LRGTKREDVE RGQVLCKPGS
IKPHTHFTAE VYVLSKDEGG RHTPFFNNYR PQFYFRTTDV TGSIELPADK EMVMPGDNVS
ITVKLIAPIA MEEGLRFAIR EGGRTVGAGV VAKIIA