Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0502 |
Symbol | |
ID | 5746039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 533152 |
End bp | 533817 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641295565 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001561533 |
Protein GI | 160895951 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGGC TCAACGATGG AAGGAAATAC ATCTTGGCAC GACGAACGAA AGAAGATGCG TTTGCAACGC GCAACAGTCT GCTGGACGCT GCGGAGCAAG TGTTCTACGA ACAGGGTGTC GCCCGGGCCT CGCTCAACGA GATTGCCCAG CGAGCCGGCG CCACGCGCGG TGCGGTCTAC TGGCATTTCA AGGACAAGCT GGATCTCTTC TACGCCATGC TGGACCGCGT CACGCTCCCG CTGGAGCAGG CGGTCTACAG CGACTGCGAG GACGATTCGG AGTGCGATGC ACTGGAATAT GTGCGGCGCC TGATGGCTGT GGTCTTCGGG CGCATCGCCG ATGACGACAG CACGCGGCGC GTCTTCGAGA TCCTGCTGCT CAAGGTGGAA TACGTGGGCG AGCTCATGCC CGTGCAGGAG CGCAACCGTG CCGCACTGGA CTCTTTTTCC GCGCAACTGG AGCTGGCGCT GCGCGCGGCT GCCGAAAGCC ATGCGGTGAC CATGTCCATG CCGGCTCCCC AGGCCTCGAT CGCGCTGTGC GCCATGTTCG ATGGCCTGTT GCAGAGCTGG CTGCTGGGAA GGGCCTTCGA TCTCAAGCAG GTGGGCGCGC AGGCGGTGGA TGTCTGCCTG CGGGGGTTGG GCTTCACGGT GCCGCAGGCG CAATAG
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Protein sequence | MAGLNDGRKY ILARRTKEDA FATRNSLLDA AEQVFYEQGV ARASLNEIAQ RAGATRGAVY WHFKDKLDLF YAMLDRVTLP LEQAVYSDCE DDSECDALEY VRRLMAVVFG RIADDDSTRR VFEILLLKVE YVGELMPVQE RNRAALDSFS AQLELALRAA AESHAVTMSM PAPQASIALC AMFDGLLQSW LLGRAFDLKQ VGAQAVDVCL RGLGFTVPQA Q
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