| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0501 |
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| Symbol | |
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| ID | 5746038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 531700 |
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| End bp | 532992 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641295564 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001561532 |
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| Protein GI | 160895950 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGCA CACGCAGCAA TGTGTCAGCC GCTCCGTCCC CTTACAGCAG TCTGCGCCTC
ACCACCGTGG CCCTGGCCGT CACTGCCGCA ATGGCCATGG CGGCCTGCGG GAAAAAGCCC
GAAGAAAAAG CTGCCGCGCA GCAGCAGATG CCCGCCGTGC CGGTGGGCGT GGTGGTCGCA
ACCCCCGCCG ACGTGGGCCT TGTGACCGAA CTCCCTGGCC GCGTGGATGC GCGCCGCGTA
GCCCAGATCC GCGCCCGCAG CGCCGGCATC GTGCAGGAAC GCCTGTTCCG GGAAGGCAGC
GATGTGAAGG CCGGCCAGGT GCTGTACCGC ATCGACCCCG CTCCCTACCA GGCCACGCTG
CAAAGCGCCA AGGCCACGCA GGCCCGCGCC GAAGCCAACC AGGCCCAGGC ACTGGCGCAG
CTGGAACGCT ACCGCCCGCT GGTTGCCGCC AACGCCATCA GCAAGCAGGA TTTCGTCAAT
GCCGAGGCAG CCTACAAGCA GGCCCAGGCC GATGTGGCGG CCGGCAAGGC GTCGGTGCGC
ACGGCCGAGA TCAATCTGGG CTACACCAAC GTCACGGCCC CCATCTCCGG CCGCATCGGC
CAGTCGCTGG TGACCGAAGG CGCGCTGGTC GGCCAGGGCG AGGCGACTCC GCTGGCCGTG
GTCCAGCAGA TCAATCCTGT CTATGTGAAC TTCACCCAGT CGTCCAGCGA GGCCTTCCGG
CTGCGCCGCG CGATGGAGCA GGGCAAGCTC AAGAAGGCCG ATGGCGCCGA GGCTGCCAGC
GTCGAGGTGC GCCTGGACGA CGGCACGGCC TATGAACTCA AGGGCAAGCT GCTGTTCACC
GACCTGACCG TGGACAGCTC CACCGGCCAG GTCACGCTGC GCGCCGAGGT GCCCAATCCC
AAGGGATTGC TGCTGCCCGG CATGTATGTG CGTGTGCGCA TGGAGCAGGC CCAGGCGTCC
AACGCCATTG CCGTGCCCCA GCAGGCGGTG ACGCGCACCG AGACCGGCGA CACCGTGAGC
GTGGTCAGCG ACGACGGCAA GATCACCAAG CGCCAGGTGA AGGTGACCAC GGCCCAGAAC
AACCAGTGGC TGGTCAGCGA AGGCCTGCAG GCGGGCGAGA AGGTCATGGT CGACGGCTTC
CAGAAGCTGC AGATGCTGCC GCCCGGCACG CCGGTCAAGC CCGTGCCCTG GCAGCCCGAG
GCCGCAGGTG CCCAGAAGCC GGCCGGCGCG GCAGCGCCAG CCCCGCAAGC CGCAGCCGAT
GCCAAGCCTG CGGACCAGGC AGACAAGAAG TAA
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| Protein sequence | MPSTRSNVSA APSPYSSLRL TTVALAVTAA MAMAACGKKP EEKAAAQQQM PAVPVGVVVA
TPADVGLVTE LPGRVDARRV AQIRARSAGI VQERLFREGS DVKAGQVLYR IDPAPYQATL
QSAKATQARA EANQAQALAQ LERYRPLVAA NAISKQDFVN AEAAYKQAQA DVAAGKASVR
TAEINLGYTN VTAPISGRIG QSLVTEGALV GQGEATPLAV VQQINPVYVN FTQSSSEAFR
LRRAMEQGKL KKADGAEAAS VEVRLDDGTA YELKGKLLFT DLTVDSSTGQ VTLRAEVPNP
KGLLLPGMYV RVRMEQAQAS NAIAVPQQAV TRTETGDTVS VVSDDGKITK RQVKVTTAQN
NQWLVSEGLQ AGEKVMVDGF QKLQMLPPGT PVKPVPWQPE AAGAQKPAGA AAPAPQAAAD
AKPADQADKK
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