| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0499 |
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| Symbol | |
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| ID | 5746036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 527079 |
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| End bp | 528536 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641295562 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001561530 |
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| Protein GI | 160895948 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAATC GCAGTACCCC GGTGGCCATC GCCACCGCCG TGCTCCTGGC GGGATGCTCG
CTCATCCCCA CCTACGAGCG CCCTGCCGCT CCGGTCGCGG CGCAGTACAC CCGCGCGAAC
GCCACCGCTG CGGCGGAAGG CGGCACGGCT GCAGCGCAGC TGCCCTGGCA GGATTTCTTC
CAGGACGCAC GCCTGCAGCA GCTGGTTCGC ACCGCGCTGG ACAACAACCG TGACCTGCGC
GTGGCCGCGC TCAACATCGA GCGCGCCCAG GCCCAGTACC GGATCACGCG CGCCGACCAG
TTCCCGACGG TCGGTGCAGG CGTCAACGCC AGCCGCGCCC CGAACACCAC GGGCTCGGGC
GCCAAGTACG TCAACAGCTA CCAGGTGGGC CTCGCCGTCA CTTCCTGGGA ACTGGACTTC
TTCGGCCGCA TCGGCAGCCT GAAGGAAGCG GCCCTGGCCC AGTACCTGGC GACCGAGGAA
GCTCGCCGCG CCGCGCAGAC CAGCCTGGTG GCCGCTGTGG CCAGCGGCTG GTATACGCTG
CTGGCCGACG AGCAACTGCT GAAGATCTCG CGCGACACGC TGCGGACCCG TGAAGAGTCG
ATCAAGCTGA CCAAGCTGCG CTTCGACACG GGCGTGGCGT CCGAGCTGGA CTACCGCCAG
GCCGTCTCGC TGACCGAGGC TGCGCGCGCC ACGCTGGCGC AGCAGCAGCG CCAGCGCGCC
CTGGATGAAA ATGCCCTTGT GCTCTTGCTC GGCCAGGCGC TGCCAGCGGA CGTGCTCGCC
AGCCTGGGCT CCAGCCAGGG ACTGCGCGAC ACGGCCGACC TGCCCGCCGT GCCGGCCGGC
CTGCCTTCGG ACCTGCTCAC GCAGCGGCCC GACATTCGCC AGGCCGAGCA GCAGCTGATC
AGTGCCAACG CCAACATCGG TGCCGCGCGT GCAGCCTTCT TCCCGCGCAT CACGCTGACG
GGGCAGTTCG GCACGGCAAG CAACGAGCTG TCGGGCCTGT TCAAGAGCGG CAGCTGGGGC
TTCACCCTCG CGCCATCCGC CCTCCTGCCC ATCTTCGATG CGGGCCGCAA TTCGGCCAAT
CTGGCTGCGG CCAAGGTCGA GCGCGAAGTG GCCATCGCCC AGTACGAGAA GTCCATCCAG
AGCGCCTTCC GCGAGGTCTC CGACGCACTG GACAGCCAGG GCACGCTGCG TGACCAGATC
ATGGCCCAGC GCGCCCAGCT CGAAGCCGAG CAGGCACGCC TGAAGCTGTC CGACCTGCGC
TACAGCAACG GCGTGGCCAG CTACCTGGAC CTGCTGGATG CACAGCGCAC CCTGTTCGCG
CTGGAGCAGT CCACCGTGAG CGTGCGTCTG GCGCAGCTGC TCAACCAGAT CGAGCTGTAC
AAGGCGCTTG GCGGCGGCTG GACCGACAGA ACAGCGACAG CAGCGGCAGC CACGCCGGCT
ACCGCGCCCG CGCAGTAA
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| Protein sequence | MINRSTPVAI ATAVLLAGCS LIPTYERPAA PVAAQYTRAN ATAAAEGGTA AAQLPWQDFF
QDARLQQLVR TALDNNRDLR VAALNIERAQ AQYRITRADQ FPTVGAGVNA SRAPNTTGSG
AKYVNSYQVG LAVTSWELDF FGRIGSLKEA ALAQYLATEE ARRAAQTSLV AAVASGWYTL
LADEQLLKIS RDTLRTREES IKLTKLRFDT GVASELDYRQ AVSLTEAARA TLAQQQRQRA
LDENALVLLL GQALPADVLA SLGSSQGLRD TADLPAVPAG LPSDLLTQRP DIRQAEQQLI
SANANIGAAR AAFFPRITLT GQFGTASNEL SGLFKSGSWG FTLAPSALLP IFDAGRNSAN
LAAAKVEREV AIAQYEKSIQ SAFREVSDAL DSQGTLRDQI MAQRAQLEAE QARLKLSDLR
YSNGVASYLD LLDAQRTLFA LEQSTVSVRL AQLLNQIELY KALGGGWTDR TATAAAATPA
TAPAQ
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