Gene Daci_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0478 
Symbol 
ID5746015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp509410 
End bp509850 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content61% 
IMG OID641295541 
ProductMerR family transcriptional regulator 
Protein accessionYP_001561509 
Protein GI160895927 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02047] Cd(II)/Pb(II)-responsive transcriptional regulator 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGTCC TGACAACATG TGAGTGTTCT GCGATGAAAA TTGGCGAGTT GAGCCACGCC 
ACCGGCGTGG ACACCGACAC GATCCGGTTC TACGAGAGGA CGGGGGTGTT GCCGCCGCCA
GCTCGGCAGA CCAATGGATA CCGGGTATAC GGGACGGAAC ACATCGATGG ACTGTCCTTT
GTCCGCCACT GCCGGGCCTT GGACATTCCT CTGGCCGATG TCAGGCGGCT CCTGAACTTC
ACATCCCGTC CGGATGAGGA TTGCGCGGAC ATCAACCGGC TGGTCGACGA GCAGATTGCG
AGGGTGCGTG CCCGCCTGAC CAGCTTGAAA GCACTGGAAA GGCAACTGAC GACGCTGCGC
GCCCGCTGCT CCGCAGGACA TCAAGCGAAA GAGTGCGGCA TCCTTGGCGA GCTGGTCTCT
GCAGCGCAGC GGGAAGCGTA G
 
Protein sequence
MHVLTTCECS AMKIGELSHA TGVDTDTIRF YERTGVLPPP ARQTNGYRVY GTEHIDGLSF 
VRHCRALDIP LADVRRLLNF TSRPDEDCAD INRLVDEQIA RVRARLTSLK ALERQLTTLR
ARCSAGHQAK ECGILGELVS AAQREA