| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0453 |
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| Symbol | |
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| ID | 5745990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 484259 |
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| End bp | 486295 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641295516 |
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| Product | hypothetical protein |
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| Protein accession | YP_001561484 |
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| Protein GI | 160895902 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACGT GCTTCGCACG CCCGGACACG CCAGAGCTTG CAGGGAGCCC AGCCATGACC
AACCGCCGCG ATGACGATTT CCGCATCCGC CCCAGCGCCC CGAAGAACCG GGGCCAGGGC
TTCGTTTCCA AGGTGCTCAA GCAGGCAGGA AAGGCCAGCA GCGGCAAGTC GGCGGTGCGC
CGTCCTGGCG GCAGTGGCAA GGGCGCCGGC ATCGGCCAGC GGCCCGGCTC GCGGCTGGGA
CGCGGCCACA CGGCGGCGCG CTTCGCGGGC GCGAAGCTCA CGCCCATGTC GCGGCGCGTG
ACCATCAAGA CGCTGCTGGT CAATCAGCAG CGGGCCAGTC CGCAGTCGCT CGCCAAGCAC
CTGCGCTACA TCGAGCGCGA CGGCGCCGGC CGCGACGGCG AGCCAGGCCA AGCCTATGGG
CCGCAGACCG ATGCTGCCGG CCTCGACGCC TTCAAGGAAC GCTGCGCCGA CGACCGGCAC
CATTTCCGCT TCATCCTCTT GCCGGAGGAT GGCGCGGAAC TGGACGACCT GCGCACCTAC
ACGCGGCATC TCATGGGCCG CATGGAAGCC GACCTGGGCA CACGGCTGGA ATGGGTGGCG
GTCGATCACT GGAACACCGA CAACCCGCAC ACCCACTTGA TCGTGCGCGG ACGCGACGAC
ACCGGCAAAG ACCTCATCAT CGCGGGCGAC TACATCGCCG ATGGCTTCCG GCATCGCGCG
TCCGAGCTGG CGACCGAATG GCTGGGGCCA CGCACCGAGC TGGAGATCCA GCAGACCTTG
CAGCGTGAAG TGGATCAGGA GCGATGGACG AGCCTGGATC GCACGCTCAA ACGCGAACTG
GGCGACGATG GCTTGGTGCA TGTCGAACGG TTCAACGAAC CGCGGCTGCA ACGCCAGCGC
CTGCTGCTGA TCGGCCGCCT GCAACGCTTG CAGCGCCTGG GCCTGGCCGA CGAGATGCAG
CCGGGCACCT GGGCCGTCCA CGCCGATGCC GAAAAGACGC TGCGCGCCCT GGGCGAGCGT
GGCGACATCA TCCGCACCAT GCAGCGGGCC ATGCGCGGCG AGCCGCGCGA GCTGGCGGTG
TTCGAGGCGG GCGACGATGG CCGAACCATC CTCGGCCGCG TGGCCGCGAA GGGGCTGGCC
GACGAGCTGC GCGACCGGGG CTATCTGGTC ATCGACGGCG TGGACGGCAA GGCCCACTAC
GTCGCGCTCA ACACCCGCGA CGAACTGGCG AACTATCCGG CCGGCGCGGT GGTGGAGGTG
AAGGGATCGG CCGATGTGCG CGCGGCCGAC AAGAACATCG CCGCGCTGGC GAGCGATGGC
CTGTACCGCA CCGACCACCA CCTCGCCATC GCGCAGGGTC AGGCCATGCC CGGCCGCGAT
CCACAGGAAG TCGTCGCAGC CCATGTCCGT CGGCTGGAAG CCTTGCGCCG CGCCGGCATT
GTGGAGCGCG TGGCCGAAGG TCTATGGAAG GTGCCGGACG ATCTGCCCGA GCAGGGCCGC
CGCTACGACG CGCAGCGCCT GGGCGGCGTG GCCGTGGAGC TGAAATCGCA CCTGCCCATC
GAGCGGCAGG CCCGAGTGAT CGGGGCCACC TGGCTCGACC AGCAGTTGAT CGGCGGCGGC
TCGGGTCTGG GCGACCTGGG CTTTGGCGGC GAGGCCAAGC AGGCGATGCA GCAGCGCGCC
GACTTCCTGG CCGAACAGGG ACTGGCCGAG CGGCGCGGGC AGCGCGTGAT CCTGGCGCGC
AACCTGCTGG GCACGCTGCG CAACCGGGAA CTGGCACAGG CCGCGAAGGA CATTGCCGGC
GAAACCGGCC TGGAGCATCG CCCGGTGGCC GATGGGCAGC GCGTGGCCGG CATCTACCGG
CGCAGCGTCA TGCTCGCCAG CGGGCGCTAC GCGATGCTCG ATGACGGCAT GGGATTCAGC
CTAGTGCCGT GGAAACCAGT GATCGAGCAA CGGCTAGGTC AGCAACTTGC TGCCACTGTA
CGCGGCGGTG GCGTGTCATG GGAGATTGGA CGGCAGAAAG GCATGTCCAT CATCTGA
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| Protein sequence | MSTCFARPDT PELAGSPAMT NRRDDDFRIR PSAPKNRGQG FVSKVLKQAG KASSGKSAVR
RPGGSGKGAG IGQRPGSRLG RGHTAARFAG AKLTPMSRRV TIKTLLVNQQ RASPQSLAKH
LRYIERDGAG RDGEPGQAYG PQTDAAGLDA FKERCADDRH HFRFILLPED GAELDDLRTY
TRHLMGRMEA DLGTRLEWVA VDHWNTDNPH THLIVRGRDD TGKDLIIAGD YIADGFRHRA
SELATEWLGP RTELEIQQTL QREVDQERWT SLDRTLKREL GDDGLVHVER FNEPRLQRQR
LLLIGRLQRL QRLGLADEMQ PGTWAVHADA EKTLRALGER GDIIRTMQRA MRGEPRELAV
FEAGDDGRTI LGRVAAKGLA DELRDRGYLV IDGVDGKAHY VALNTRDELA NYPAGAVVEV
KGSADVRAAD KNIAALASDG LYRTDHHLAI AQGQAMPGRD PQEVVAAHVR RLEALRRAGI
VERVAEGLWK VPDDLPEQGR RYDAQRLGGV AVELKSHLPI ERQARVIGAT WLDQQLIGGG
SGLGDLGFGG EAKQAMQQRA DFLAEQGLAE RRGQRVILAR NLLGTLRNRE LAQAAKDIAG
ETGLEHRPVA DGQRVAGIYR RSVMLASGRY AMLDDGMGFS LVPWKPVIEQ RLGQQLAATV
RGGGVSWEIG RQKGMSII
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