Gene Daci_0448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0448 
Symbol 
ID5745985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp478399 
End bp478884 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content64% 
IMG OID641295511 
Producthypothetical protein 
Protein accessionYP_001561479 
Protein GI160895897 
COG category[R] General function prediction only 
COG ID[COG3019] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.673346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC ACTACGACAG AAGCCAGGGC AAAGTGCCGA GACGCCAAGC ATTGATCGCT 
GGCTTGTTGG TGATGGCACT CGCAGGACCG AGCCTGGCGC AGAGCCGACC GATCGCCAAG
GTGTGGAAGG ACCCGAGCTG CGGTTGCTGC AAGGACTGGG TCTCACACCT GCAAGGCGCA
GGCTTCGATG TGCAGGTTCT TGACACCGGG AACACGGCAG CGCGCACGCG GCTGGGCATC
CCGCAGAAGT ACGGTTCGTG CCACACGGCG CAGATCGGCG GCTATGCCAT CGAGGGTCAT
GTGCCTGCCT CGGACATTCA ACGCTTGCTG CGCGAAGCCC CGCAGGCCAT CGGCCTCGCG
GCGCCGGGCA TGCCGGTCGG TTCGCCCGGC ATGGATGGTC CGGCCTATGG TGGACGCAAG
GACGCCTACG ACGTGCTGCT GATCGGGAAA AACGGTAGTA GCACGGTCTA TCAGTCGCAT
CGCTGA
 
Protein sequence
MNMHYDRSQG KVPRRQALIA GLLVMALAGP SLAQSRPIAK VWKDPSCGCC KDWVSHLQGA 
GFDVQVLDTG NTAARTRLGI PQKYGSCHTA QIGGYAIEGH VPASDIQRLL REAPQAIGLA
APGMPVGSPG MDGPAYGGRK DAYDVLLIGK NGSSTVYQSH R