| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0437 |
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| Symbol | |
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| ID | 5745974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 468175 |
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| End bp | 468558 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641295500 |
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| Product | conjugal transfer protein TrbC |
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| Protein accession | YP_001561468 |
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| Protein GI | 160895886 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGCAGA TGACCATTCC TGCTTTCCGT TTTTCTGCAA ATCCGGCTTT GCGTCTTGCG
CGGCTGCGCT GCCTGGCCCG TCCTGCGGGG CAAGGGCTGC TGCTGGCCGC GTTGCTGTTG
TTCCTGGCCG GAGCCGCGCA GGCCGCCGGT TCCTCGATGC CGTGGGAAGG CCCGCTGCAA
TCCATCCTCG AATCCATCCA GGGGCCGGTG GCGCGCATCG TCGCGGTCAT CATCATCATC
GCCACGGGCC TCGCGCTCGC GTTCGGCGAC ACGTCCGGCG GGTTCCGCAA GCTGATCCAG
ATCGTATTCG GTCTGTCCAT CGCGTTCGCC GCTTCGAGCT TCTTCCTGTC GTTCTTCAGC
TTCTCCGGCG GGGCGGTCGT ATGA
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| Protein sequence | MTQMTIPAFR FSANPALRLA RLRCLARPAG QGLLLAALLL FLAGAAQAAG SSMPWEGPLQ
SILESIQGPV ARIVAVIIII ATGLALAFGD TSGGFRKLIQ IVFGLSIAFA ASSFFLSFFS
FSGGAVV
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