| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0431 |
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| Symbol | |
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| ID | 5745968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 462310 |
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| End bp | 463014 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641295494 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_001561462 |
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| Protein GI | 160895880 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.469364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTCA AACGACCGCA GGTGCGCTAT GCCGACACGC CGCAGCCTGC TACTCCGTAC
CAATCCGCCG CACAGGTGTG GGACGAGCGC ATCGGCTCGG CCCGCGTGCA GGCGAAGAAC
TGGCGTTTCA TGGCCTTCGG CTGTCTCACG CTGGCCGTGC TGATGGCCGG GGGCCTGGTC
TGGCGCTCGG CGCAATCCAT CGTGACACCC TATGTCATCG AGGTGGACAA CGCGGGCCAA
GTGCGCGCCG TGGGCGAGGC CGCTACGCCG TACCGGCCCA GCGATGCGCA GATCGCCTAC
CACCTGGGCC GCTTCATCGG CCTGGTGCGC TCGCTGTCCA TCGACCCGAT CGTGGTGCGG
CAGAACTGGC TGGACGCCTA CGACTACACC ACCGACAAGG GCGCCGTGGT GCTCAACGAG
TACGCCCGCG TGAACGATCC GTTCGCGCGC ATCGGCAAGG AGTCGGTGAC GGTGCAGATC
ACCAGCGTGA CCCGCGCCAG CGACGCCTCT TTCAACGTGC GCTGGACGGA ACAACGCTTC
GTCAACGGCG CTCCTGCTGG CACCGAACGC TGGAACGCGG TGATTTCCAT CGTGCAGCAG
ACCCCGCGCA CCGAACAGCG CCTGCGCAAG AACCCGTTGG GCATCTACGT CAACGGCCTG
TCGTGGAGCC GCGAACTGGA TTCTTCCGAA GGAGCCAAGC CATGA
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| Protein sequence | MRFKRPQVRY ADTPQPATPY QSAAQVWDER IGSARVQAKN WRFMAFGCLT LAVLMAGGLV
WRSAQSIVTP YVIEVDNAGQ VRAVGEAATP YRPSDAQIAY HLGRFIGLVR SLSIDPIVVR
QNWLDAYDYT TDKGAVVLNE YARVNDPFAR IGKESVTVQI TSVTRASDAS FNVRWTEQRF
VNGAPAGTER WNAVISIVQQ TPRTEQRLRK NPLGIYVNGL SWSRELDSSE GAKP
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