| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0430 |
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| Symbol | |
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| ID | 5745967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 461324 |
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| End bp | 462313 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641295493 |
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| Product | P-type conjugative transfer protein TrbG |
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| Protein accession | YP_001561461 |
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| Protein GI | 160895879 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.127006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGT CTTTCCGTAC TTACGTTTCC GTGCTGGCGC TCGCGGCCCT GGCGGGCTGC
GCCACCCAGG GCAAGCCGCC GCCGACCATC TCGCTCGATG AGCCGGTGCA GGCGCAGCCG
CTGCCGGAGC CGCCTGCACC TGTGGAGGCG GTCGCTGTGC CCGAGGTGCT GCCGATGCCG
GCACAGTTGA AGCCAGCGCC CGAGGGCGAA GAAGCCAAGC CGGCGCCGGA GCCGGTCGAC
GAGAAGGTGC GCGTCTCACG GGCCAATACC GAGGCGCGCG TCGCGCCCAC GCGCGAGGGC
TACGTCAACG CGATTCAGGT GTGGCCTTTC ACGGACGGCG CGCTGTATCA GGTCTATGCG
GCCGTGGGCC GCGTGACCGT GATCGCGCTC CAGCCCGGTG AGGAACTGGT GACGGTGGCC
GCTGGCGACA CGGTGCGCTG GATCGTGGGC GACACATCGA GCGGCAGCGG GGATGCGCTG
CGCGTGAACG TGATGGTCAA GCCCATCCGC TCGGGCCTCA AGACGAATCT CGTTGTAACC
ACCAGCCGAC GCACCTATCT GCTGGAACTG ACCTCGACAG AGAAGACATG GATGGCGTCG
ATATCCTGGG AGTACCCCAA GGACAAGATG CTCGCCTTGC AGCGCCAGGC GCAGGCGGCC
AGCGCCGCCG CGCCGGTCGA GACCGGGCTG TCGCTGGAGA AGATCCGTTT CCGCTATGCC
ATCAGTGGCA GCAATCCGCC GTGGAAGCCG CTGCGCGCCT TCGATGACGG CGAGAAGGTA
TATATCCAGT TTCCCGCCGG CATCGCCCAG GGCGAGTTGC CGCCGCTGTT CGTGATCGGT
GCGCAGGGCG ACGGGCAATT GGTGAACTAC CGCTTCCGCT CGCCGTATTT CATCGTTGAT
CGCTTGTTCG GCGCTGCCGA GTTGCGCTTG GGCGGGGACA AGGGCGACGT GGTGCGGATC
GAGCGCACCG ACGGCACGCG GGGGAACTGA
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| Protein sequence | MNPSFRTYVS VLALAALAGC ATQGKPPPTI SLDEPVQAQP LPEPPAPVEA VAVPEVLPMP
AQLKPAPEGE EAKPAPEPVD EKVRVSRANT EARVAPTREG YVNAIQVWPF TDGALYQVYA
AVGRVTVIAL QPGEELVTVA AGDTVRWIVG DTSSGSGDAL RVNVMVKPIR SGLKTNLVVT
TSRRTYLLEL TSTEKTWMAS ISWEYPKDKM LALQRQAQAA SAAAPVETGL SLEKIRFRYA
ISGSNPPWKP LRAFDDGEKV YIQFPAGIAQ GELPPLFVIG AQGDGQLVNY RFRSPYFIVD
RLFGAAELRL GGDKGDVVRI ERTDGTRGN
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